(34 nodes) SCF ubiquitin ligase complex network (Capitella teleta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7TZE7_CAPTE	F-box domain-containing protein. (313 aa)
	R7UVI9_CAPTE	Uncharacterized protein; Belongs to the SKP1 family. (173 aa)
	R7UUG3_CAPTE	F-box domain-containing protein. (353 aa)
	R7UQQ1_CAPTE	Uncharacterized protein. (314 aa)
	R7UK10_CAPTE	RRM domain-containing protein. (497 aa)
	R7UIZ8_CAPTE	F-box domain-containing protein. (297 aa)
	R7UGV1_CAPTE	Uncharacterized protein. (113 aa)
	R7UF48_CAPTE	F-box domain-containing protein. (298 aa)
	R7UEM9_CAPTE	F-box domain-containing protein. (486 aa)
	R7UDW6_CAPTE	Uncharacterized protein. (315 aa)
	R7U943_CAPTE	Uncharacterized protein. (575 aa)
	R7U836_CAPTE	Uncharacterized protein. (530 aa)
	R7U3F4_CAPTE	F-box domain-containing protein. (532 aa)
	R7U0V2_CAPTE	F-box domain-containing protein. (405 aa)
	R7TZN3_CAPTE	F-box domain-containing protein. (399 aa)
	R7TD38_CAPTE	Uncharacterized protein. (520 aa)
	R7TY00_CAPTE	Uncharacterized protein. (316 aa)
	R7TX86_CAPTE	Uncharacterized protein. (170 aa)
	R7TX59_CAPTE	F-box domain-containing protein. (260 aa)
	R7TJ08_CAPTE	F-box domain-containing protein. (327 aa)
	R7THW3_CAPTE	Uncharacterized protein. (425 aa)
	R7TFN2_CAPTE	F-box domain-containing protein. (280 aa)
	R7T491_CAPTE	CULLIN_2 domain-containing protein; Belongs to the cullin family. (771 aa)
	R7T5Q3_CAPTE	F-box domain-containing protein. (390 aa)
	R7T8D2_CAPTE	F-box domain-containing protein. (451 aa)
	R7VFV5_CAPTE	F-box domain-containing protein. (764 aa)
	R7VF96_CAPTE	Uncharacterized protein. (382 aa)
	R7VDT7_CAPTE	Uncharacterized protein. (289 aa)
	R7V6Y5_CAPTE	UvrD-like helicase C-terminal domain-containing protein. (405 aa)
	R7V2E0_CAPTE	F-box domain-containing protein. (477 aa)
	R7UZ96_CAPTE	F-box domain-containing protein. (439 aa)
	R7UXR3_CAPTE	Uncharacterized protein. (519 aa)
	R7UX38_CAPTE	Uncharacterized protein. (199 aa)
	R7UVQ5_CAPTE	Uncharacterized protein. (270 aa)

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7T491_CAPTE	R7T5Q3_CAPTE	R7T491	R7T5Q3	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.740
R7T491_CAPTE	R7T8D2_CAPTE	R7T491	R7T8D2	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.987
R7T491_CAPTE	R7TD38_CAPTE	R7T491	R7TD38	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.992
R7T491_CAPTE	R7TFN2_CAPTE	R7T491	R7TFN2	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.876
R7T491_CAPTE	R7THW3_CAPTE	R7T491	R7THW3	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.648
R7T491_CAPTE	R7TJ08_CAPTE	R7T491	R7TJ08	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.989
R7T491_CAPTE	R7TX59_CAPTE	R7T491	R7TX59	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.939
R7T491_CAPTE	R7TX86_CAPTE	R7T491	R7TX86	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.836
R7T491_CAPTE	R7TY00_CAPTE	R7T491	R7TY00	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.939
R7T491_CAPTE	R7TZE7_CAPTE	R7T491	R7TZE7	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.971
R7T491_CAPTE	R7TZN3_CAPTE	R7T491	R7TZN3	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.965
R7T491_CAPTE	R7U0V2_CAPTE	R7T491	R7U0V2	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.876
R7T491_CAPTE	R7U3F4_CAPTE	R7T491	R7U3F4	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.880
R7T491_CAPTE	R7U836_CAPTE	R7T491	R7U836	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.700
R7T491_CAPTE	R7U943_CAPTE	R7T491	R7U943	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.700
R7T491_CAPTE	R7UDW6_CAPTE	R7T491	R7UDW6	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.891
R7T491_CAPTE	R7UEM9_CAPTE	R7T491	R7UEM9	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.700
R7T491_CAPTE	R7UF48_CAPTE	R7T491	R7UF48	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.891
R7T491_CAPTE	R7UGV1_CAPTE	R7T491	R7UGV1	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.870
R7T491_CAPTE	R7UIZ8_CAPTE	R7T491	R7UIZ8	CULLIN_2 domain-containing protein; Belongs to the cullin family.	F-box domain-containing protein.	0.989

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