(14 nodes) Cation efflux transmembrane domain superfamily network (Capitella teleta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7U2X8_CAPTE	Uncharacterized protein. (440 aa)
	R7U4N5_CAPTE	Uncharacterized protein. (255 aa)
	R7UHC3_CAPTE	Uncharacterized protein. (241 aa)
	R7TEA0_CAPTE	Uncharacterized protein. (222 aa)
	R7UR35_CAPTE	Uncharacterized protein. (356 aa)
	R7V6E8_CAPTE	Uncharacterized protein. (306 aa)
	R7VCJ5_CAPTE	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (421 aa)
	R7UHY9_CAPTE	ZT_dimer domain-containing protein. (382 aa)
	R7TDI7_CAPTE	Uncharacterized protein. (288 aa)
	R7TA79_CAPTE	Uncharacterized protein. (416 aa)
	R7T475_CAPTE	Uncharacterized protein. (327 aa)
	R7TS70_CAPTE	Uncharacterized protein. (735 aa)
	R7TU79_CAPTE	Uncharacterized protein. (473 aa)
	R7TZ33_CAPTE	Uncharacterized protein. (451 aa)

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7T475_CAPTE	R7TS70_CAPTE	R7T475	R7TS70	Uncharacterized protein.	Uncharacterized protein.	0.404
R7T475_CAPTE	R7TU79_CAPTE	R7T475	R7TU79	Uncharacterized protein.	Uncharacterized protein.	0.414
R7T475_CAPTE	R7UR35_CAPTE	R7T475	R7UR35	Uncharacterized protein.	Uncharacterized protein.	0.425
R7TA79_CAPTE	R7TDI7_CAPTE	R7TA79	R7TDI7	Uncharacterized protein.	Uncharacterized protein.	0.493
R7TA79_CAPTE	R7TS70_CAPTE	R7TA79	R7TS70	Uncharacterized protein.	Uncharacterized protein.	0.490
R7TA79_CAPTE	R7TU79_CAPTE	R7TA79	R7TU79	Uncharacterized protein.	Uncharacterized protein.	0.548
R7TA79_CAPTE	R7TZ33_CAPTE	R7TA79	R7TZ33	Uncharacterized protein.	Uncharacterized protein.	0.424
R7TA79_CAPTE	R7U2X8_CAPTE	R7TA79	R7U2X8	Uncharacterized protein.	Uncharacterized protein.	0.499
R7TA79_CAPTE	R7UHY9_CAPTE	R7TA79	R7UHY9	Uncharacterized protein.	ZT_dimer domain-containing protein.	0.424
R7TA79_CAPTE	R7UR35_CAPTE	R7TA79	R7UR35	Uncharacterized protein.	Uncharacterized protein.	0.478
R7TDI7_CAPTE	R7TA79_CAPTE	R7TDI7	R7TA79	Uncharacterized protein.	Uncharacterized protein.	0.493
R7TDI7_CAPTE	R7TS70_CAPTE	R7TDI7	R7TS70	Uncharacterized protein.	Uncharacterized protein.	0.434
R7TDI7_CAPTE	R7TU79_CAPTE	R7TDI7	R7TU79	Uncharacterized protein.	Uncharacterized protein.	0.544
R7TDI7_CAPTE	R7UR35_CAPTE	R7TDI7	R7UR35	Uncharacterized protein.	Uncharacterized protein.	0.431
R7TS70_CAPTE	R7T475_CAPTE	R7TS70	R7T475	Uncharacterized protein.	Uncharacterized protein.	0.404
R7TS70_CAPTE	R7TA79_CAPTE	R7TS70	R7TA79	Uncharacterized protein.	Uncharacterized protein.	0.490
R7TS70_CAPTE	R7TDI7_CAPTE	R7TS70	R7TDI7	Uncharacterized protein.	Uncharacterized protein.	0.434
R7TS70_CAPTE	R7TU79_CAPTE	R7TS70	R7TU79	Uncharacterized protein.	Uncharacterized protein.	0.502
R7TS70_CAPTE	R7U2X8_CAPTE	R7TS70	R7U2X8	Uncharacterized protein.	Uncharacterized protein.	0.438
R7TS70_CAPTE	R7UHY9_CAPTE	R7TS70	R7UHY9	Uncharacterized protein.	ZT_dimer domain-containing protein.	0.449

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