(23 nodes) BRCT domain superfamily network (Capitella teleta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R7VD68_CAPTE	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (556 aa)
	R7VAU2_CAPTE	BRCT domain-containing protein. (730 aa)
	R7V5J4_CAPTE	Uncharacterized protein. (862 aa)
	R7V1P1_CAPTE	BRCT domain-containing protein. (110 aa)
	R7UZD1_CAPTE	BRCT domain-containing protein. (216 aa)
	R7UVV7_CAPTE	DNA ligase. (905 aa)
	R7UTQ4_CAPTE	Uncharacterized protein. (829 aa)
	R7URF6_CAPTE	Uncharacterized protein. (238 aa)
	R7UP83_CAPTE	DNA ligase. (841 aa)
	R7UNK6_CAPTE	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (617 aa)
	R7UJC6_CAPTE	Poly [ADP-ribose] polymerase. (2146 aa)
	R7UEB7_CAPTE	Uncharacterized protein. (1004 aa)
	R7UDI5_CAPTE	BRCT domain-containing protein. (266 aa)
	R7U747_CAPTE	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (847 aa)
	R7U653_CAPTE	Uncharacterized protein. (965 aa)
	R7TSM6_CAPTE	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (562 aa)
	R7TSH5_CAPTE	FHA domain-containing protein. (318 aa)
	R7TPZ3_CAPTE	BRCT domain-containing protein. (400 aa)
	R7TLU1_CAPTE	Uncharacterized protein. (649 aa)
	R7TLB0_CAPTE	Uncharacterized protein. (199 aa)
	R7TI88_CAPTE	Poly [ADP-ribose] polymerase. (994 aa)
	R7T9A8_CAPTE	Uncharacterized protein. (1445 aa)
	R7T7U7_CAPTE	Uncharacterized protein. (538 aa)

Your Current Organism:

Capitella teleta

NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R7T7U7_CAPTE	R7TI88_CAPTE	R7T7U7	R7TI88	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.428
R7T7U7_CAPTE	R7TLU1_CAPTE	R7T7U7	R7TLU1	Uncharacterized protein.	Uncharacterized protein.	0.951
R7T7U7_CAPTE	R7TPZ3_CAPTE	R7T7U7	R7TPZ3	Uncharacterized protein.	BRCT domain-containing protein.	0.764
R7T7U7_CAPTE	R7TSH5_CAPTE	R7T7U7	R7TSH5	Uncharacterized protein.	FHA domain-containing protein.	0.783
R7T7U7_CAPTE	R7U747_CAPTE	R7T7U7	R7U747	Uncharacterized protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.562
R7T7U7_CAPTE	R7UJC6_CAPTE	R7T7U7	R7UJC6	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.428
R7T7U7_CAPTE	R7URF6_CAPTE	R7T7U7	R7URF6	Uncharacterized protein.	Uncharacterized protein.	0.561
R7T7U7_CAPTE	R7V1P1_CAPTE	R7T7U7	R7V1P1	Uncharacterized protein.	BRCT domain-containing protein.	0.764
R7T7U7_CAPTE	R7VAU2_CAPTE	R7T7U7	R7VAU2	Uncharacterized protein.	BRCT domain-containing protein.	0.731
R7T7U7_CAPTE	R7VD68_CAPTE	R7T7U7	R7VD68	Uncharacterized protein.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.764
R7T9A8_CAPTE	R7TLB0_CAPTE	R7T9A8	R7TLB0	Uncharacterized protein.	Uncharacterized protein.	0.841
R7T9A8_CAPTE	R7TLU1_CAPTE	R7T9A8	R7TLU1	Uncharacterized protein.	Uncharacterized protein.	0.400
R7T9A8_CAPTE	R7TSH5_CAPTE	R7T9A8	R7TSH5	Uncharacterized protein.	FHA domain-containing protein.	0.920
R7T9A8_CAPTE	R7U653_CAPTE	R7T9A8	R7U653	Uncharacterized protein.	Uncharacterized protein.	0.841
R7T9A8_CAPTE	R7URF6_CAPTE	R7T9A8	R7URF6	Uncharacterized protein.	Uncharacterized protein.	0.942
R7T9A8_CAPTE	R7UTQ4_CAPTE	R7T9A8	R7UTQ4	Uncharacterized protein.	Uncharacterized protein.	0.865
R7T9A8_CAPTE	R7VAU2_CAPTE	R7T9A8	R7VAU2	Uncharacterized protein.	BRCT domain-containing protein.	0.529
R7TI88_CAPTE	R7T7U7_CAPTE	R7TI88	R7T7U7	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.428
R7TI88_CAPTE	R7TLU1_CAPTE	R7TI88	R7TLU1	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.767
R7TI88_CAPTE	R7TPZ3_CAPTE	R7TI88	R7TPZ3	Poly [ADP-ribose] polymerase.	BRCT domain-containing protein.	0.499

page 1 of 10

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About