Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAPTEDRAFT_198 | R7T564_CAPTE | R7TC80 | R7T564 | Uncharacterized protein. | Myb_DNA-bind_2 domain-containing protein. | 0.647 |
| CAPTEDRAFT_198 | R7THB3_CAPTE | R7TC80 | R7THB3 | Uncharacterized protein. | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | 0.576 |
| CAPTEDRAFT_198 | R7UBK7_CAPTE | R7TC80 | R7UBK7 | Uncharacterized protein. | Telo_bind domain-containing protein. | 0.817 |
| CAPTEDRAFT_198 | R7UCR7_CAPTE | R7TC80 | R7UCR7 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.961 |
| CAPTEDRAFT_198 | R7UFU2_CAPTE | R7TC80 | R7UFU2 | Uncharacterized protein. | ATP-dependent DNA helicase; Belongs to the helicase family. | 0.614 |
| CAPTEDRAFT_198 | R7UJZ4_CAPTE | R7TC80 | R7UJZ4 | Uncharacterized protein. | DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. | 0.525 |
| CAPTEDRAFT_198 | R7UXH4_CAPTE | R7TC80 | R7UXH4 | Uncharacterized protein. | Uncharacterized protein. | 0.525 |
| CAPTEDRAFT_198 | R7UXI7_CAPTE | R7TC80 | R7UXI7 | Uncharacterized protein. | PUA domain-containing protein. | 0.996 |
| CAPTEDRAFT_198 | R7UZV4_CAPTE | R7TC80 | R7UZV4 | Uncharacterized protein. | CS domain-containing protein. | 0.965 |
| CAPTEDRAFT_198 | R7V0U0_CAPTE | R7TC80 | R7V0U0 | Uncharacterized protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.999 |
| CAPTEDRAFT_198 | R7V1X6_CAPTE | R7TC80 | R7V1X6 | Uncharacterized protein. | RuvB-like helicase; Belongs to the RuvB family. | 0.532 |
| CAPTEDRAFT_198 | R7V8H6_CAPTE | R7TC80 | R7V8H6 | Uncharacterized protein. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.996 |
| CAPTEDRAFT_198 | R7VBP3_CAPTE | R7TC80 | R7VBP3 | Uncharacterized protein. | RuvB-like helicase. | 0.533 |
| CAPTEDRAFT_198 | R7VD82_CAPTE | R7TC80 | R7VD82 | Uncharacterized protein. | Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. | 0.576 |
| FEN1 | R7T564_CAPTE | R7V1L7 | R7T564 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Myb_DNA-bind_2 domain-containing protein. | 0.577 |
| FEN1 | R7T5N4_CAPTE | R7V1L7 | R7T5N4 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | REPA_OB_2 domain-containing protein. | 0.821 |
| FEN1 | R7T6L8_CAPTE | R7V1L7 | R7T6L8 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Helicase C-terminal domain-containing protein. | 0.804 |
| FEN1 | R7TFS3_CAPTE | R7V1L7 | R7TFS3 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | Uncharacterized protein. | 0.530 |
| FEN1 | R7TGI4_CAPTE | R7V1L7 | R7TGI4 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | DNA polymerase. | 0.994 |
| FEN1 | R7THB3_CAPTE | R7V1L7 | R7THB3 | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | DNA primase; Belongs to the eukaryotic-type primase small subunit family. | 0.965 |
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