STRINGSTRING
aer aer IL0175 IL0175 IL0206 IL0206 fliL_1 fliL_1 IL0318 IL0318 IL0426 IL0426 IL0495 IL0495 IL0500 IL0500 IL0510 IL0510 IL0511 IL0511 IL0512 IL0512 trg trg IL0755 IL0755 IL0829 IL0829 IL0923 IL0923 IL0935 IL0935 IL0992 IL0992 IL1068 IL1068 IL1090 IL1090 IL1109 IL1109 cheW_1 cheW_1 cheW_2 cheW_2 IL1112 IL1112 cheB cheB cheA cheA cheZ cheZ cheY cheY fliA fliA fleN fleN flhF flhF flhA flhA IL1132 IL1132 fliS fliS fliD fliD flaG flaG fliC fliC flgL flgL flgK flgK flgJ flgJ flgI flgI flgH flgH flgG flgG flgF flgF flgE flgE flgD flgD flgC flgC flgB flgB cheR cheR IL1149 IL1149 flgA flgA flgM flgM flgN flgN flhB flhB fliR fliR fliQ fliQ fliP fliP fliO fliO fliN fliN fliM fliM fliL_2 fliL_2 fliK fliK fliJ fliJ fliI fliI fliH_1 fliH_1 fliG fliG fliF fliF fliE fliE fliH_2 fliH_2 IL1203 IL1203 hyfR hyfR IL1205 IL1205 IL1206 IL1206 IL1207 IL1207 IL1208 IL1208 IL1296 IL1296 IL1447 IL1447 IL1539 IL1539 IL1544 IL1544 IL1673 IL1673 IL1686 IL1686 IL1710 IL1710 rsbU rsbU rsbV rsbV IL1715 IL1715 barA barA IL1741 IL1741 IL1776 IL1776 IL1784 IL1784 IL1786 IL1786 IL1851 IL1851 IL1880 IL1880 IL2005 IL2005 IL2064 IL2064 IL2065 IL2065 IL2120 IL2120 motB motB motA motA IL2152 IL2152 IL2168 IL2168 IL2169 IL2169 IL2172 IL2172 IL2209 IL2209 IL2267 IL2267 IL2293 IL2293 IL2322 IL2322 IL2343 IL2343 IL2344 IL2344 IL2387 IL2387 IL2414 IL2414 IL2456 IL2456 IL2487 IL2487 IL2494 IL2494 IL2535 IL2535 IL2545 IL2545 IL2581 IL2581 IL2582 IL2582 IL2583 IL2583 IL2584 IL2584 gene:10330387 gene:10330387
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
aerMethyl-accepting chemotaxis protein (PAS/PAC and MSP doamins). (523 aa)
IL0175Methyl-accepting chemotaxis protein; Contains hemerythrin domain. (832 aa)
IL0206Intracellular signaling protein (GAF,GGDEF,EAL domains). (866 aa)
fliL_1Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (132 aa)
IL0318Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains. (850 aa)
IL0426Signaling protein with a sensor domain, CHASE, GGDEF and EAL domains. (712 aa)
IL0495Probable signal transduction protein, containing Hpt domain. (118 aa)
IL0500Signalling protein containing EAL domain. (244 aa)
IL0510Chemotaxis response regulator; Contains two CheY domains. (340 aa)
IL0511PAS domain containing signalling protein. (139 aa)
IL0512Dinucleotide-utilizing enzyme of HesA/MoeB/ThiF family. (263 aa)
trgMethyl-accepting chemotaxis protein (contains HAMP domain). (541 aa)
IL0755Signaling protein with a MHYT sensor domain, PAS, GGDEF and EAL domains. (829 aa)
IL0829Response regulator with TPR repeat. (547 aa)
IL0923Response regulator containing a CheY-like receiver domain and an HD-GYP domain. (490 aa)
IL0935Signaling protein with a sensor domain, HAMP, GGDEF and EAL domains. (763 aa)
IL0992Signaling protein with a ligand-binding sensor domain, PAS, GGDEF and EAL domains. (1230 aa)
IL1068Methyl-accepting chemotaxis protein with ligand-binding sensor domain and HAMP domain. (543 aa)
IL1090Signaling protein with a periplasmic binding domain and GGDEF domain. (476 aa)
IL1109Uncharacterized conserved secreted protein. (150 aa)
cheW_1Chemotaxis protein CheW. (167 aa)
cheW_2CheW-like domain containing protein. (285 aa)
IL1112ATPase involved in chromosome partitioning, Soj/ParA family. (258 aa)
cheBChemotaxis response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (386 aa)
cheAChemotaxis-specific histidine kinase; Contains HPT and CheW domains. (716 aa)
cheZChemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). (249 aa)
cheYChemotaxis protein CheY. (123 aa)
fliADNA-directed RNA polymerase specialized sigma 28 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (241 aa)
fleNAntiactivator of flagellar biosynthesis; ATPase; FleN. (290 aa)
flhFFlagellar biosynthetic protein FlhF; GTPase. (444 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (717 aa)
IL1132Hypothetical protein. (94 aa)
fliSFlagellin-specific chaperone FliS. (140 aa)
fliDFlagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (463 aa)
flaGFlaG; Uncharacterized flagellar protein. (136 aa)
fliCFlagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (471 aa)
flgLFlagellin; Hook-filament junction protein. (404 aa)
flgKFlagellar hook-associated protein. (671 aa)
flgJFlagellum-specific muramidase. (325 aa)
flgIFlagellar basal-body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (366 aa)
flgHFlagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (224 aa)
flgGFlagella basal body rod protein; Belongs to the flagella basal body rod proteins family. (262 aa)
flgFFlagella basal body rod protein. (247 aa)
flgEFlagellar hook protein FlgE. (449 aa)
flgDFlagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein. (227 aa)
flgCFlagellar basal body rod protein; Belongs to the flagella basal body rod proteins family. (150 aa)
flgBFlagellar basal body protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (134 aa)
cheRMethylase of chemotaxis methyl-accepting proteins; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (278 aa)
IL1149Chemotaxis protein CheV. (311 aa)
flgAFlagellar basal body P-ring biosynthesis protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (240 aa)
flgMNegative regulator of flagellin synthesis; Anti-sigma28 factor. (107 aa)
flgNFlagellar synthesis protein FlgN. (133 aa)
flhBFlagellar biosynthesis proten FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (375 aa)
fliRFlagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (261 aa)
fliQFlagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
fliPFlagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (248 aa)
fliOFlagellar biosynthesis protein. (107 aa)
fliNFlagellar motor switch; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (151 aa)
fliMFlagellar motor switch protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (356 aa)
fliL_2Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (180 aa)
fliKFlagellar hook-length control protein. (588 aa)
fliJFlagellar biosynthesis chaperone. (147 aa)
fliIType III secretory pathway ATPase. (449 aa)
fliH_1Type III secretory pathway protein. (249 aa)
fliGFlagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (348 aa)
fliFFlagellar basal body M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (570 aa)
fliEFlagellar hook-basal body protein. (110 aa)
fliH_2Flagellar biosynthesis protein. (453 aa)
IL1203Signal transduction histidine kinase (contains PAS domain). (335 aa)
hyfRProbable response regulator of flagellar motility; Sigma-54 dependent transcriptional activator. (478 aa)
IL1205Uncharacterized conserved protein. (175 aa)
IL1206Response regulator, LuxR family (CheY, HTH domains). (207 aa)
IL1207Predicted metal-dependent amidohydrolase with the TIM-barrel fold. (550 aa)
IL1208Response regulator containing a CheY-like receiver domain and an HD-GYP domain. (520 aa)
IL1296Methyl-accepting chemotaxis protein; Contains HAMP domain. (546 aa)
IL1447Hybrid sensor histidine kinase; Contains PAS, HisK, CheY domains. (644 aa)
IL1539Signaling protein; Contains PAS, GGDEF, EAL domains. (529 aa)
IL1544Signaling protein with a PAS and GGDEF domains. (300 aa)
IL1673Methyl-accepting chemotaxis protein (2 PAS,MCP domains). (431 aa)
IL1686Signaling protein with a GGDEF domain. (301 aa)
IL1710Signal transduction histidine kinase. (227 aa)
rsbUResponse regulator of sigma subunit, serine phosphatase (CheY-RsbU). (556 aa)
rsbVAnti-anti-sigma regulatory factor; Antagonist of anti-sigma factor. (101 aa)
IL1715Chemotaxis protein CheY (2 CheY domains). (264 aa)
barAHybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains). (866 aa)
IL1741Signaling protein with TPR repeats and GGDEF domain. (605 aa)
IL1776Methyl-accepting chemotaxis protein (CHASE3,HAMP,MCP domains). (612 aa)
IL1784Disrupted signaling protein (xGGDEF and EAL domains). (443 aa)
IL1786Uncharacterized membrane protein, contains PAS domain. (207 aa)
IL1851Chemotaxis protein CheY. (125 aa)
IL1880Methyl-accepting chemotaxis protein (contains HAMP domain). (563 aa)
IL2005Multidomain protein contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain. (1157 aa)
IL2064Methyl-accepting chemotaxis protein (2 PAS,MCP domains). (436 aa)
IL2065Signaling protein with a GGDEF domain. (290 aa)
IL2120Signal transduction histidine kinase. (577 aa)
motBFlagellar motor protein. (312 aa)
motAFlagellar motor component. (255 aa)
IL2152Multidomain protein, contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain. (1115 aa)
IL2168Membrane associated signaling protein (contains EAL and inactivated GGDEF domain). (562 aa)
IL2169Membrane-anchored signaling protein (PAS,GGDEF,EAL doamins). (754 aa)
IL2172Methyl-accepting chemotaxis protein. (517 aa)
IL2209Methyl-accepting chemotaxis protein (contains HAMP domain). (591 aa)
IL2267Signaling protein (CHEY,EAL,GGDEF domains). (737 aa)
IL2293Signaling protein (EAL,CBS,GGDEF domains). (592 aa)
IL2322Intracellular signaling protein (2 PAS, GGDEF,EAL domains). (681 aa)
IL2343Methyl-accepting chemotaxis protein (contains HAMP domain). (546 aa)
IL2344Intracellular signaling protein (GAF,PAS,GGDEF,EAL domains). (766 aa)
IL2387Intracellular signaling protein (2 PAS, GGDEF domains). (392 aa)
IL2414Intracellular signaling protein (PAS,GGDEF domains). (299 aa)
IL2456Signaling protein with DMT-family integral membrane sensor domain, GGDEF and EAL domains. (690 aa)
IL2487Intracellular signaling protein (PAS,GAF,GGDEF domains). (453 aa)
IL2494Intracellular signaling protein (PAS,GAF,GGDEF domains). (462 aa)
IL2535Intracellular signaling protein (GAF,GGDEF domains). (369 aa)
IL2545Signaling protein; Possible DMT family transporter; GGDEF,EAL domains. (930 aa)
IL2581Predicted intracellular protease/amidase, ThiJ/PfpL family. (228 aa)
IL2582Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (446 aa)
IL2583Signal transduction histidine kinase, contains HAMP domain. (474 aa)
IL2584Uncharacterized conserved secreted protein. (126 aa)
gene:10330387annotation not available (343 aa)
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis L2TR, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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