(13 nodes) PAS domain, and Histidine Phosphotransfer domain network (Idiomarina loihiensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	IL0318	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains. (850 aa)
	IL0495	Probable signal transduction protein, containing Hpt domain. (118 aa)
	IL0755	Signaling protein with a MHYT sensor domain, PAS, GGDEF and EAL domains. (829 aa)
	IL0935	Signaling protein with a sensor domain, HAMP, GGDEF and EAL domains. (763 aa)
	IL0992	Signaling protein with a ligand-binding sensor domain, PAS, GGDEF and EAL domains. (1230 aa)
	IL1447	Hybrid sensor histidine kinase; Contains PAS, HisK, CheY domains. (644 aa)
	IL2005	Multidomain protein contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain. (1157 aa)
	IL2152	Multidomain protein, contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain. (1115 aa)
	IL2293	Signaling protein (EAL,CBS,GGDEF domains). (592 aa)
	IL2322	Intracellular signaling protein (2 PAS, GGDEF,EAL domains). (681 aa)
	IL2344	Intracellular signaling protein (GAF,PAS,GGDEF,EAL domains). (766 aa)
	IL2494	Intracellular signaling protein (PAS,GAF,GGDEF domains). (462 aa)
	IL2583	Signal transduction histidine kinase, contains HAMP domain. (474 aa)

Your Current Organism:

Idiomarina loihiensis

NCBI taxonomy Id: 283942
Other names: I. loihiensis L2TR, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
IL0318	IL0495	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Probable signal transduction protein, containing Hpt domain.	0.953
IL0318	IL0755	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Signaling protein with a MHYT sensor domain, PAS, GGDEF and EAL domains.	0.922
IL0318	IL0935	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Signaling protein with a sensor domain, HAMP, GGDEF and EAL domains.	0.879
IL0318	IL0992	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Signaling protein with a ligand-binding sensor domain, PAS, GGDEF and EAL domains.	0.773
IL0318	IL1447	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Hybrid sensor histidine kinase; Contains PAS, HisK, CheY domains.	0.860
IL0318	IL2005	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Multidomain protein contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain.	0.808
IL0318	IL2152	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Multidomain protein, contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain.	0.986
IL0318	IL2293	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Signaling protein (EAL,CBS,GGDEF domains).	0.888
IL0318	IL2322	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Intracellular signaling protein (2 PAS, GGDEF,EAL domains).	0.912
IL0318	IL2344	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Intracellular signaling protein (GAF,PAS,GGDEF,EAL domains).	0.959
IL0318	IL2494	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Intracellular signaling protein (PAS,GAF,GGDEF domains).	0.917
IL0318	IL2583	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	Signal transduction histidine kinase, contains HAMP domain.	0.531
IL0495	IL0318	Probable signal transduction protein, containing Hpt domain.	Signaling protein with a periplasmic amino acid-binding domain, GGDEF and EAL domains.	0.953
IL0495	IL0755	Probable signal transduction protein, containing Hpt domain.	Signaling protein with a MHYT sensor domain, PAS, GGDEF and EAL domains.	0.995
IL0495	IL0935	Probable signal transduction protein, containing Hpt domain.	Signaling protein with a sensor domain, HAMP, GGDEF and EAL domains.	0.972
IL0495	IL0992	Probable signal transduction protein, containing Hpt domain.	Signaling protein with a ligand-binding sensor domain, PAS, GGDEF and EAL domains.	0.987
IL0495	IL1447	Probable signal transduction protein, containing Hpt domain.	Hybrid sensor histidine kinase; Contains PAS, HisK, CheY domains.	0.984
IL0495	IL2005	Probable signal transduction protein, containing Hpt domain.	Multidomain protein contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain.	0.992
IL0495	IL2152	Probable signal transduction protein, containing Hpt domain.	Multidomain protein, contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain.	0.990
IL0495	IL2293	Probable signal transduction protein, containing Hpt domain.	Signaling protein (EAL,CBS,GGDEF domains).	0.961