STRINGSTRING
rps7 rps7 rps12 rps12 SDW21780.1 SDW21780.1 SDW21864.1 SDW21864.1 SDW28587.1 SDW28587.1 SDW21904.1 SDW21904.1 SDW28768.1 SDW28768.1 rps24e rps24e rps27ae rps27ae rnz rnz SDW29713.1 SDW29713.1 SDW29833.1 SDW29833.1 SDW22044.1 SDW22044.1 SDW22073.1 SDW22073.1 SDW30379.1 SDW30379.1 SDW30595.1 SDW30595.1 SDW22095.1 SDW22095.1 rfcS rfcS SDW22130.1 SDW22130.1 SDW31271.1 SDW31271.1 SDW22186.1 SDW22186.1 SDW31996.1 SDW31996.1 SDW22345.1 SDW22345.1 SDW22374.1 SDW22374.1 SDW32844.1 SDW32844.1 SDW22473.1 SDW22473.1 SDW33579.1 SDW33579.1 SDW33644.1 SDW33644.1 SDW33832.1 SDW33832.1 rps6e rps6e SDW21380.1 SDW21380.1 SDW40177.1 SDW40177.1 SDW40562.1 SDW40562.1 SDW40806.1 SDW40806.1 nfo nfo SDW41123.1 SDW41123.1 SDW41504.1 SDW41504.1 SDW41724.1 SDW41724.1 SDW37732.1 SDW37732.1 SDW42780.1 SDW42780.1 SDW43164.1 SDW43164.1 SDW43758.1 SDW43758.1 SDW44343.1 SDW44343.1 SDW44385.1 SDW44385.1 SDW45835.1 SDW45835.1 SDW38652.1 SDW38652.1 SDW39016.1 SDW39016.1 rpl15e rpl15e SDW52281.1 SDW52281.1 nth nth SDW53945.1 SDW53945.1 SDW54261.1 SDW54261.1 spt5 spt5 tbp tbp SDW55244.1 SDW55244.1 SDW55296.1 SDW55296.1 SDW55511.1 SDW55511.1 rps10-2 rps10-2 SDW55846.1 SDW55846.1 SDW56344.1 SDW56344.1 SDW49969.1 SDW49969.1 SDW56673.1 SDW56673.1 SDW50224.1 SDW50224.1 tfe tfe SDW50990.1 SDW50990.1 SDW51304.1 SDW51304.1 SDW49498.1 SDW49498.1 SDW51880.1 SDW51880.1 SDW63345.1 SDW63345.1 hemA hemA rpl15 rpl15 dnaG dnaG rpl30 rpl30 rps5 rps5 rfcL rfcL rpl18 rpl18 rpl19e rpl19e rpl32e rpl32e thi4 thi4 rpl6 rpl6 SDW65223.1 SDW65223.1 rps8 rps8 rps14 rps14 SDW65737.1 SDW65737.1 rpl5 rpl5 rps4e rps4e SDW66207.1 SDW66207.1 mre11 mre11 rpl24 rpl24 rpl14 rpl14 rps17 rps17 rpl29 rpl29 rps3 rps3 rpl22 rpl22 rps19p rps19p rpl2 rpl2 rpl23 rpl23 rpl4 rpl4 rpl3 rpl3 SDW61213.1 SDW61213.1 SDW61269.1 SDW61269.1 gatB gatB topA topA rpl37ae rpl37ae SDW71070.1 SDW71070.1 SDW02949.1 SDW02949.1 SDW73967.1 SDW73967.1 rps17e rps17e rad25 rad25 nac nac SDW75315.1 SDW75315.1 rps13 rps13 rps4 rps4 SDW75965.1 SDW75965.1 rps11 rps11 rpl21e rpl21e rpl18e rpl18e rpl13 rpl13 priS priS rps9 rps9 rps2 rps2 SDW71864.1 SDW71864.1 SDW72060.1 SDW72060.1 SDW72086.1 SDW72086.1 SDW72114.1 SDW72114.1 rpl7ae rpl7ae rps28e rps28e rpl24e rpl24e SDW72628.1 SDW72628.1 SDW73009.1 SDW73009.1 SDW73112.1 SDW73112.1 SDW73483.1 SDW73483.1 SDW82327.1 SDW82327.1 SDW82526.1 SDW82526.1 priL priL mutS2 mutS2 SDW83291.1 SDW83291.1 hel308 hel308 SDW83675.1 SDW83675.1 SDW79839.1 SDW79839.1 SDW80582.1 SDW80582.1 trm1 trm1 SDW79977.1 SDW79977.1 rpl40e rpl40e SDW82011.1 SDW82011.1 SDW87485.1 SDW87485.1 SDW86139.1 SDW86139.1 SDW86532.1 SDW86532.1 SDW86600.1 SDW86600.1 SDX37661.1 SDX37661.1 SDX36151.1 SDX36151.1 SDX34665.1 SDX34665.1 SDX34876.1 SDX34876.1 SDX34836.1 SDX34836.1 SDX34223.1 SDX34223.1 SDX33784.1 SDX33784.1 cetZ-3 cetZ-3 SDX32809.1 SDX32809.1 SDX32562.1 SDX32562.1 SDX32230.1 SDX32230.1 SDX32171.1 SDX32171.1 SDX25729.1 SDX25729.1 SDX24464.1 SDX24464.1 SDX24168.1 SDX24168.1 SDX24138.1 SDX24138.1 SDX24003.1 SDX24003.1 SDX23976.1 SDX23976.1 SDX21435.1 SDX21435.1 SDX21418.1 SDX21418.1 SDX21619.1 SDX21619.1 SDX21549.1 SDX21549.1 SDX21509.1 SDX21509.1 SDX20504.1 SDX20504.1 SDX20422.1 SDX20422.1 SDX20341.1 SDX20341.1 SDX19693.1 SDX19693.1 SDX19907.1 SDX19907.1 endA endA SDX18813.1 SDX18813.1 SDX18795.1 SDX18795.1 SDX18749.1 SDX18749.1 SDX18723.1 SDX18723.1 SDX17645.1 SDX17645.1 SDX18356.1 SDX18356.1 SDX17995.1 SDX17995.1 SDX17730.1 SDX17730.1 SDX16735.1 SDX16735.1 SDX14082.1 SDX14082.1 SDX13945.1 SDX13945.1 SDX13879.1 SDX13879.1 SDX12670.1 SDX12670.1 SDX12643.1 SDX12643.1 SDX10397.1 SDX10397.1 rpl11 rpl11 SDX09428.1 SDX09428.1 rpl1 rpl1 rpl10 rpl10 rpl12 rpl12 SDX11074.1 SDX11074.1 SDX07527.1 SDX07527.1 SDW86657.1 SDW86657.1 thyX thyX SDW89192.1 SDW89192.1 SDW91885.1 SDW91885.1 SDW90519.1 SDW90519.1 SDW91261.1 SDW91261.1 SDW91457.1 SDW91457.1 SDW95971.1 SDW95971.1 top6A top6A top6B top6B gyrB gyrB gyrA gyrA SDW94595.1 SDW94595.1 SDW93515.1 SDW93515.1 SDW94819.1 SDW94819.1 SDW94867.1 SDW94867.1 SDW94922.1 SDW94922.1 SDW95357.1 SDW95357.1 SDW98535.1 SDW98535.1 SDW98725.1 SDW98725.1 SDW98760.1 SDW98760.1 SDW99275.1 SDW99275.1 rps3ae rps3ae rps15 rps15 SDX02111.1 SDX02111.1 SDX02159.1 SDX02159.1 rps8e rps8e SDX03092.1 SDX03092.1 SDX03540.1 SDX03540.1 SDX06076.1 SDX06076.1 SDX07171.1 SDX07171.1 SDX25235.1 SDX25235.1 SDX26418.1 SDX26418.1 SDX27991.1 SDX27991.1 SDX31487.1 SDX31487.1 SDW03218.1 SDW03218.1 rpl39e rpl39e rpl31e rpl31e rpl18a rpl18a SDW04117.1 SDW04117.1 SDW04220.1 SDW04220.1 SDW04328.1 SDW04328.1 SDW04362.1 SDW04362.1 SDW04524.1 SDW04524.1 rps19e rps19e SDW05236.1 SDW05236.1 truA truA pus10 pus10 SDW06631.1 SDW06631.1 SDW06892.1 SDW06892.1 cetZ cetZ SDW07953.1 SDW07953.1 SDW08363.1 SDW08363.1 SDW08397.1 SDW08397.1 dnaK dnaK truB truB SDW10157.1 SDW10157.1 SDW10585.1 SDW10585.1 kptA kptA SDW01614.1 SDW01614.1 SDW11142.1 SDW11142.1 SDW11343.1 SDW11343.1 SDW01745.1 SDW01745.1 nop10 nop10 rps27e rps27e rpl44e rpl44e SDW14964.1 SDW14964.1 SDW15088.1 SDW15088.1 SDW15241.1 SDW15241.1 fen fen SDW16011.1 SDW16011.1 SDW02047.1 SDW02047.1 SDW02141.1 SDW02141.1 SDW02853.1 SDW02853.1 SDW24403.1 SDW24403.1 SDW25405.1 SDW25405.1 SDW25433.1 SDW25433.1 SDW21577.1 SDW21577.1 SDW25903.1 SDW25903.1 rpl10e rpl10e SDW26901.1 SDW26901.1 rps10 rps10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rps7SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. (206 aa)
rps12SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. (142 aa)
SDW21780.1Ferredoxin. (105 aa)
SDW21864.1dTDP-glucose 4,6-dehydratase. (294 aa)
SDW28587.1Ribosomal RNA assembly protein. (182 aa)
SDW21904.1Ferredoxin [2Fe-2S]. (194 aa)
SDW28768.1Replication factor C small subunit. (366 aa)
rps24eSSU ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family. (102 aa)
rps27aeSSU ribosomal protein S27AE; Belongs to the eukaryotic ribosomal protein eS31 family. (44 aa)
rnzRNAse Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (311 aa)
SDW29713.1Ferredoxin [2Fe-2S]. (129 aa)
SDW29833.1Methyltransferase domain-containing protein. (200 aa)
SDW22044.1Flagellar protein FlaH. (253 aa)
SDW22073.1Flagellar protein FlaG. (150 aa)
SDW30379.12Fe-2S iron-sulfur cluster binding domain-containing protein. (111 aa)
SDW30595.1Flagellin FlaB; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. (209 aa)
SDW22095.1Flagellar protein FlaF. (145 aa)
rfcSReplication factor C small subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. (325 aa)
SDW22130.1Flagellar protein FlaE. (552 aa)
SDW31271.1Arsenite efflux ATP-binding protein ArsA. (324 aa)
SDW22186.1Two-component system, chemotaxis family, sensor kinase CheA/chemotaxis protein CheC. (405 aa)
SDW31996.1Chemotaxis protein CheC. (214 aa)
SDW22345.1Flagellin FlaB; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. (208 aa)
SDW22374.1Flagellin FlaB; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. (207 aa)
SDW32844.1Ferredoxin. (220 aa)
SDW22473.1RecA-superfamily ATPase, KaiC/GvpD/RAD55 family. (241 aa)
SDW33579.1IMP dehydrogenase. (281 aa)
SDW33644.1Fanconi anemia group M protein. (837 aa)
SDW33832.1Hypothetical protein. (213 aa)
rps6eSSU ribosomal protein S6E; Belongs to the eukaryotic ribosomal protein eS6 family. (129 aa)
SDW21380.1Aconitase. (657 aa)
SDW40177.1Ubiquinone/menaquinone biosynthesis C-methylase UbiE. (242 aa)
SDW40562.1Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain. (108 aa)
SDW40806.1Transitional endoplasmic reticulum ATPase. (695 aa)
nfoEndonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (277 aa)
SDW41123.1Methyltransferase domain-containing protein. (263 aa)
SDW41504.1Alanine-glyoxylate aminotransferase apoenzyme. (393 aa)
SDW41724.1Putative hydrolase of the HAD superfamily. (242 aa)
SDW37732.1Putative mRNA 3-end processing factor. (410 aa)
SDW42780.1Deoxyribodipyrimidine photo-lyase. (533 aa)
SDW43164.1FMN phosphatase YigB, HAD superfamily. (212 aa)
SDW43758.1Endonuclease-3. (277 aa)
SDW44343.1DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (452 aa)
SDW44385.1A/G-specific DNA-adenine glycosylase. (264 aa)
SDW45835.1Replication factor A1. (94 aa)
SDW38652.1ATP-binding cassette, sub-family E, member 1. (609 aa)
SDW39016.1RNA-binding protein, containing PUA domain. (159 aa)
rpl15eLSU ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family. (196 aa)
SDW52281.1Transitional endoplasmic reticulum ATPase. (757 aa)
nthDNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (227 aa)
SDW53945.1Cytochrome b(C-terminal)/b6/petD. (254 aa)
SDW54261.1Deoxyribodipyrimidine photo-lyase family protein (cryptochrome); Belongs to the DNA photolyase family. (464 aa)
spt5LSU ribosomal protein L24A; Stimulates transcription elongation; Belongs to the archaeal Spt5 family. (145 aa)
tbpTATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. (186 aa)
SDW55244.1DNA excision repair protein ERCC-2. (815 aa)
SDW55296.1Arsenite efflux ATP-binding protein ArsA. (362 aa)
SDW55511.1DNA polymerase (family 10). (578 aa)
rps10-2SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (110 aa)
SDW55846.1Ferredoxin. (110 aa)
SDW56344.1metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. (239 aa)
SDW49969.18-amino-7-oxononanoate synthase. (400 aa)
SDW56673.1DNA repair helicase RAD25. (444 aa)
SDW50224.1Transcriptional regulator, XRE family. (166 aa)
tfeTranscription factor E (TFE); Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. [...] (176 aa)
SDW50990.1Uncharacterized conserved protein, contains NRDE domain. (245 aa)
SDW51304.1Deoxyribodipyrimidine photo-lyase type I; Belongs to the DNA photolyase family. (465 aa)
SDW49498.1Reversibly glycosylated polypeptide. (387 aa)
SDW51880.1Transitional endoplasmic reticulum ATPase. (706 aa)
SDW63345.1Pterin-4-alpha-carbinolamine dehydratase. (92 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (448 aa)
rpl15LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (165 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (445 aa)
rpl30LSU ribosomal protein L30P. (154 aa)
rps5SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. (212 aa)
rfcLReplication factor C large subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. (503 aa)
rpl18LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (187 aa)
rpl19eLSU ribosomal protein L19E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (149 aa)
rpl32eLSU ribosomal protein L32E; Belongs to the eukaryotic ribosomal protein eL32 family. (241 aa)
thi4Thiazole-adenylate synthase; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur. (311 aa)
rpl6LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (178 aa)
SDW65223.1AAA+-type ATPase, SpoVK/Ycf46/Vps4 family. (846 aa)
rps8SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa)
rps14SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles. (61 aa)
SDW65737.1Methyltransferase domain-containing protein. (234 aa)
rpl5LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (177 aa)
rps4eSSU ribosomal protein S4E; Belongs to the eukaryotic ribosomal protein eS4 family. (251 aa)
SDW66207.1Replicative DNA polymerase I. (935 aa)
mre11DNA repair exonuclease SbcCD nuclease subunit; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity; Belongs to the MRE11/RAD32 family. (417 aa)
rpl24LSU ribosomal protein L24P; Located at the polypeptide exit tunnel on the outside of the subunit. (120 aa)
rpl14LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (132 aa)
rps17SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (117 aa)
rpl29LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. (71 aa)
rps3SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. (304 aa)
rpl22LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (155 aa)
rps19pSSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (140 aa)
rpl2LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (240 aa)
rpl23LSU ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. (85 aa)
rpl4LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. (246 aa)
rpl3LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (327 aa)
SDW61213.1Hypothetical protein. (281 aa)
SDW61269.1Uncharacterized protein, MTH1187 family. (110 aa)
gatBaspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (504 aa)
topADNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (827 aa)
rpl37aeLSU ribosomal protein L37AE; Binds to the 23S rRNA. (116 aa)
SDW71070.1TIM-barrel protein, putative. (248 aa)
SDW02949.1uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. (253 aa)
SDW73967.1CBS domain-containing protein. (137 aa)
rps17eSSU ribosomal protein S17E; Belongs to the eukaryotic ribosomal protein eS17 family. (63 aa)
rad25DNA excision repair protein ERCC-3. (621 aa)
nacNascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. (129 aa)
SDW75315.1DNA-directed RNA polymerase, subunit M. (99 aa)
rps13SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. (177 aa)
rps4SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (171 aa)
SDW75965.12-haloacid dehalogenase. (226 aa)
rps11SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. (129 aa)
rpl21eLSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. (96 aa)
rpl18eLSU ribosomal protein L18AE; Belongs to the eukaryotic ribosomal protein eL18 family. (116 aa)
rpl13LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (145 aa)
priSDNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...] (392 aa)
rps9SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (132 aa)
rps2SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. (273 aa)
SDW71864.1Arsenite efflux ATP-binding protein ArsA. (313 aa)
SDW72060.1Electron transfer flavoprotein beta subunit. (294 aa)
SDW72086.1Electron transfer flavoprotein alpha subunit apoprotein. (554 aa)
SDW72114.1Electron transfer flavoprotein-quinone oxidoreductase. (553 aa)
rpl7aeLSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. (120 aa)
rps28eSSU ribosomal protein S28E; Belongs to the eukaryotic ribosomal protein eS28 family. (75 aa)
rpl24eLSU ribosomal protein L24E; Binds to the 23S rRNA. (117 aa)
SDW72628.1CBS domain-containing protein. (191 aa)
SDW73009.1Circadian clock protein KaiC. (496 aa)
SDW73112.1Putative SOS response-associated peptidase YedK. (233 aa)
SDW73483.1Pyruvate dehydrogenase E1 component alpha subunit. (370 aa)
SDW82327.1Membrane protease FtsH catalytic subunit; Belongs to the AAA ATPase family. (449 aa)
SDW82526.1SSU processome protein Utp24. (125 aa)
priLDNA primase large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. (358 aa)
mutS2DNA mismatch repair protein, MutS family; Has ATPase and non-specific DNA-binding activities. Belongs to the DNA mismatch repair MutS family. Archaeal Muts2 subfamily. (682 aa)
SDW83291.1ORC complex protein Cdc6/Orc1; Involved in regulation of DNA replication. (375 aa)
hel308Helicase; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks. (800 aa)
SDW83675.12,4-dienoyl-CoA reductase. (434 aa)
SDW79839.1ORC complex protein Cdc6/Orc1; Involved in regulation of DNA replication. (524 aa)
SDW80582.1Replication factor A1. (314 aa)
trm1N(2),N(2)-dimethylguanosine tRNA methyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (367 aa)
SDW79977.1DNA excision repair protein ERCC-2. (725 aa)
rpl40eLSU ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family. (49 aa)
SDW82011.1Methyltransferase domain-containing protein. (236 aa)
SDW87485.1SSU ribosomal protein S17E. (65 aa)
SDW86139.1NAD(P)H-binding. (247 aa)
SDW86532.1Beta-carotene 15,15'-monooxygenase. (486 aa)
SDW86600.1Methyltransferase domain-containing protein. (205 aa)
SDX37661.1Hypothetical protein. (383 aa)
SDX36151.1ORC complex protein Cdc6/Orc1; Involved in regulation of DNA replication. (454 aa)
SDX34665.1DEAD/DEAH box helicase domain-containing protein. (786 aa)
SDX34876.1ERCC4 domain-containing protein. (165 aa)
SDX34836.1DNA repair helicase RAD25. (470 aa)
SDX34223.1ORC complex protein Cdc6/Orc1; Involved in regulation of DNA replication. (418 aa)
SDX33784.1Arsenite efflux ATP-binding protein ArsA. (641 aa)
cetZ-3Cell division GTPase FtsZ; Involved in cell shape control; Belongs to the CetZ family. (368 aa)
SDX32809.1Cell division control protein 6; Involved in regulation of DNA replication. (252 aa)
SDX32562.1CDC6 protein, C terminal. (112 aa)
SDX32230.1Homoserine O-acetyltransferase. (128 aa)
SDX32171.1Long-chain acyl-CoA synthetase. (660 aa)
SDX25729.1Methyltransferase. (208 aa)
SDX24464.16-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. (151 aa)
SDX24168.1ORC complex protein Cdc6/Orc1; Involved in regulation of DNA replication. (342 aa)
SDX24138.1Putative SOS response-associated peptidase YedK. (237 aa)
SDX24003.1DNA polymerase I. (716 aa)
SDX23976.1ORC complex protein Cdc6/Orc1; Involved in regulation of DNA replication. (484 aa)
SDX21435.1DNA polymerase I. (720 aa)
SDX21418.1ORC complex protein Cdc6/Orc1; Involved in regulation of DNA replication. (425 aa)
SDX21619.1Helicase conserved C-terminal domain-containing protein. (585 aa)
SDX21549.1ORC complex protein Cdc6/Orc1. (342 aa)
SDX21509.1Putative SOS response-associated peptidase YedK. (228 aa)
SDX20504.1AhpC/TSA family protein. (196 aa)
SDX20422.1Chemotaxis protein CheC. (200 aa)
SDX20341.1ORC complex protein Cdc6/Orc1; Involved in regulation of DNA replication. (442 aa)
SDX19693.1Alcohol dehydrogenase. (408 aa)
SDX19907.1Sirohydrochlorin cobaltochelatase. (293 aa)
endAtRNA-intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5' and 3' splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. (341 aa)
SDX18813.1Replicative superfamily II helicase. (832 aa)
SDX18795.12-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase. (277 aa)
SDX18749.1Pyruvate dehydrogenase E1 component alpha subunit. (368 aa)
SDX18723.1Pyruvate dehydrogenase E1 component beta subunit. (332 aa)
SDX17645.1Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. (312 aa)
SDX18356.1Methyltransferase domain-containing protein. (249 aa)
SDX17995.1RecA-superfamily ATPase, KaiC/GvpD/RAD55 family. (228 aa)
SDX17730.1Rad3-related DNA helicase. (575 aa)
SDX16735.16-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. (125 aa)
SDX14082.1Cell division control protein 6; Involved in regulation of DNA replication. (395 aa)
SDX13945.1Biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase subunit alpha. (594 aa)
SDX13879.1Cyclopropane-fatty-acyl-phospholipid synthase. (240 aa)
SDX12670.1Pyruvate dehydrogenase E1 component alpha subunit. (382 aa)
SDX12643.1Pyruvate dehydrogenase E1 component beta subunit. (338 aa)
SDX10397.1Methyltransferase domain-containing protein. (200 aa)
rpl11LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. (162 aa)
SDX09428.1Glutamyl-tRNAGlu reductase, dimerisation domain. (90 aa)
rpl1LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. (212 aa)
rpl10LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (348 aa)
rpl12LSU ribosomal protein L12AE; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. (115 aa)
SDX11074.1Transcriptional regulator, BolA protein family. (80 aa)
SDX07527.1Endonuclease-3. (233 aa)
SDW86657.1Hemerythrin-like metal-binding domain protein. (611 aa)
thyXThymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. (247 aa)
SDW89192.1RecA-superfamily ATPase, KaiC/GvpD/RAD55 family. (209 aa)
SDW91885.1Hypothetical protein. (129 aa)
SDW90519.1Ribosome maturation protein SDO1. (242 aa)
SDW91261.1DNA mismatch repair protein, MutS family. (585 aa)
SDW91457.1Replication factor A1. (426 aa)
SDW95971.1O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. (166 aa)
top6ADNA topoisomerase-6 subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. (368 aa)
top6BDNA topoisomerase-6 subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity. (796 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (642 aa)
gyrADNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (815 aa)
SDW94595.1Methyltransferase domain-containing protein. (229 aa)
SDW93515.1DNA-directed RNA polymerase, subunit M; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (107 aa)
SDW94819.1Transcriptional regulator, XRE family. (176 aa)
SDW94867.1Adenylate kinase; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily. (168 aa)
SDW94922.1Chemotaxis protein CheC. (232 aa)
SDW95357.12-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). (257 aa)
SDW98535.1DNA replication ATP-dependent helicase Dna2. (913 aa)
SDW98725.1Methyltransferase domain-containing protein. (204 aa)
SDW98760.1Ribonuclease BN, tRNA processing enzyme. (250 aa)
SDW99275.1A/G-specific DNA-adenine glycosylase. (311 aa)
rps3aeSSU ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family. (213 aa)
rps15SSU ribosomal protein S15P. (153 aa)
SDX02111.1Transitional endoplasmic reticulum ATPase. (741 aa)
SDX02159.1CBS domain-containing protein. (380 aa)
rps8eSSU ribosomal protein S8E. (123 aa)
SDX03092.1Flagellar protein FlaE. (161 aa)
SDX03540.1NADH dehydrogenase subunit M. (511 aa)
SDX06076.1ORC complex protein Cdc6/Orc1; Involved in regulation of DNA replication. (414 aa)
SDX07171.1Methyltransferase domain-containing protein. (186 aa)
SDX25235.14-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (440 aa)
SDX26418.1Hypothetical protein. (286 aa)
SDX27991.1Hypothetical protein. (365 aa)
SDX31487.1Restriction endonuclease Mrr. (454 aa)
SDW03218.1Trans-aconitate methyltransferase. (260 aa)
rpl39eLSU ribosomal protein L39E; Belongs to the eukaryotic ribosomal protein eL39 family. (50 aa)
rpl31eLarge subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family. (92 aa)
rpl18aLarge subunit ribosomal protein LX. (57 aa)
SDW04117.1CBS domain-containing protein. (297 aa)
SDW04220.1Putative hydrolase of the HAD superfamily. (207 aa)
SDW04328.1Electron transfer flavoprotein alpha subunit apoprotein. (316 aa)
SDW04362.1Electron transfer flavoprotein beta subunit. (263 aa)
SDW04524.1V/A-type H+-transporting ATPase subunit I. (742 aa)
rps19eSSU ribosomal protein S19E; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (153 aa)
SDW05236.1RecA-superfamily ATPase, KaiC/GvpD/RAD55 family. (208 aa)
truAtRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. (279 aa)
pus10tRNA pseudouridine synthase 10; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs. (455 aa)
SDW06631.1UDPglucose 6-dehydrogenase. (435 aa)
SDW06892.1CBS domain-containing protein. (138 aa)
cetZCell division GTPase FtsZ; Involved in cell shape control; Belongs to the CetZ family. (393 aa)
SDW07953.1NADH dehydrogenase. (299 aa)
SDW08363.1Hypothetical protein. (261 aa)
SDW08397.1Peptidyl-prolyl cis-trans isomerase A (cyclophilin A)/peptidyl-prolyl cis-trans isomerase B (cyclophilin B). (182 aa)
dnaKMolecular chaperone DnaK; Acts as a chaperone. (634 aa)
truBtRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. (296 aa)
SDW10157.1DEAD/DEAH box helicase domain-containing protein. (810 aa)
SDW10585.1KaiC domain protein, AF_0351 family. (375 aa)
kptAPutative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (222 aa)
SDW01614.1Protoporphyrin IX magnesium-chelatase. (717 aa)
SDW11142.13-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. (405 aa)
SDW11343.1Isocitrate dehydrogenase (NADP). (420 aa)
SDW01745.1Sirohydrochlorin ferrochelatase. (257 aa)
nop10H/ACA ribonucleoprotein complex subunit 3; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA. (60 aa)
rps27eSSU ribosomal protein S27E. (57 aa)
rpl44eLSU ribosomal protein L44E; Binds to the 23S rRNA. (92 aa)
SDW14964.1Hypothetical protein. (407 aa)
SDW15088.1Biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase subunit alpha. (614 aa)
SDW15241.1DNA-directed RNA polymerase subunit M; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (105 aa)
fenFlap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] (326 aa)
SDW16011.1snoRNP protein GAR1. (75 aa)
SDW02047.12-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). (238 aa)
SDW02141.1Aspartate aminotransferase. (381 aa)
SDW02853.1Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain. (124 aa)
SDW24403.1Transcriptional regulator, PadR family. (165 aa)
SDW25405.1Archaeal histone-like protein. (145 aa)
SDW25433.1Replication factor A1. (490 aa)
SDW21577.16-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. (149 aa)
SDW25903.1Methyltransferase domain-containing protein. (224 aa)
rpl10eLSU ribosomal protein L10AE; Belongs to the universal ribosomal protein uL16 family. (170 aa)
SDW26901.1Nucleolar GTP-binding protein. (331 aa)
rps10SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa)
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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