75 items (Haloarcula vallismortis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	SDW95485.1	Deoxyribodipyrimidine photolyase-related protein. (524 aa)
	tyrS	tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily. (346 aa)
	thiI	Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. (395 aa)
	SDW87511.1	NAD+ synthase; Belongs to the NAD synthetase family. (282 aa)
	SDW82081.1	Nucleotide-binding universal stress protein, UspA family. (147 aa)
	SDW83236.1	tRNA-specific 2-thiouridylase/uncharacterized protein. (293 aa)
	SDW72086.1	Electron transfer flavoprotein alpha subunit apoprotein. (554 aa)
	SDW72060.1	Electron transfer flavoprotein beta subunit. (294 aa)
	gltX	glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (579 aa)
	SDW77064.1	Universal stress protein family protein. (148 aa)
	SDW76027.1	Nucleotide-binding universal stress protein, UspA family. (143 aa)
	SDW62194.1	Amino acid/polyamine/organocation transporter, APC superfamily. (734 aa)
	metG	methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (732 aa)
	SDW64630.1	Universal stress protein family protein. (131 aa)
	valS	valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 2 subfamily. (919 aa)
	SDW51304.1	Deoxyribodipyrimidine photo-lyase type I; Belongs to the DNA photolyase family. (465 aa)
	SDW50316.1	Pantetheine-phosphate adenylyltransferase. (162 aa)
	SDW57103.1	Nucleotide-binding universal stress protein, UspA family. (150 aa)
	SDW56344.1	metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. (239 aa)
	SDW55924.1	Sulfate adenylyltransferase subunit 2. (325 aa)
	SDW54411.1	Nucleotide-binding universal stress protein, UspA family. (288 aa)
	SDW54261.1	Deoxyribodipyrimidine photo-lyase family protein (cryptochrome); Belongs to the DNA photolyase family. (464 aa)
	SDW53743.1	Nucleotide-binding universal stress protein, UspA family. (168 aa)
	SDW53049.1	Nucleotide-binding universal stress protein, UspA family. (146 aa)
	SDW52516.1	Nucleotide-binding universal stress protein, UspA family. (138 aa)
	SDW43673.1	Nicotinamide-nucleotide adenylyltransferase. (188 aa)
	SDW42780.1	Deoxyribodipyrimidine photo-lyase. (533 aa)
	SDW41375.1	TIGR00269 family protein. (331 aa)
	SDW04952.1	Nucleotide-binding universal stress protein, UspA family. (298 aa)
	lysS	lysyl-tRNA synthetase, class I; Belongs to the class-I aminoacyl-tRNA synthetase family. (545 aa)
	SDW05213.1	Hypothetical protein. (205 aa)
	SDW06306.1	Nucleotide-binding universal stress protein, UspA family. (157 aa)
	SDW10643.1	Universal stress protein family protein. (147 aa)
	SDW13907.1	Nucleotide-binding universal stress protein, UspA family. (139 aa)
	guaAB	GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. (305 aa)
	SDW13930.1	Nucleotide-binding universal stress protein, UspA family. (296 aa)
	SDW15044.1	Nucleotide-binding universal stress protein, UspA family. (159 aa)
	SDW24644.1	Pantetheine-phosphate adenylyltransferase. (211 aa)
	queC	7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (232 aa)
	SDW26549.1	Nucleotide-binding universal stress protein, UspA family. (143 aa)
	nadE	NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. (277 aa)
	ileS	Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1074 aa)
	SDW32342.1	Universal stress protein family protein. (124 aa)
	SDW32575.1	leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (892 aa)
	SDW32773.1	Nucleotide-binding universal stress protein, UspA family. (143 aa)
	argG	Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (424 aa)
	SDW22983.1	Nucleotide-binding universal stress protein, UspA family. (154 aa)
	SDW23004.1	Nucleotide-binding universal stress protein, UspA family. (144 aa)
	SDW23068.1	Nucleotide-binding universal stress protein, UspA family. (123 aa)
	SDW10669.1	Nucleotide-binding universal stress protein, UspA family. (143 aa)
	SDW12650.1	Nucleotide-binding universal stress protein, UspA family. (143 aa)
	SDW03823.1	Nucleotide-binding universal stress protein, UspA family. (132 aa)
	SDW04328.1	Electron transfer flavoprotein alpha subunit apoprotein. (316 aa)
	SDW04362.1	Electron transfer flavoprotein beta subunit. (263 aa)
	argS	arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (579 aa)
	SDX12493.1	Nucleotide-binding universal stress protein, UspA family. (298 aa)
	SDX09976.1	Asparagine synthase (glutamine-hydrolysing). (364 aa)
	SDX09017.1	Nucleotide-binding universal stress protein, UspA family. (137 aa)
	SDX06988.1	Nucleotide-binding universal stress protein, UspA family. (300 aa)
	SDX16429.1	Nucleotide-binding universal stress protein, UspA family. (144 aa)
	SDX18540.1	leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (892 aa)
	trpS	tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). (549 aa)
	cysS	cysteinyl-tRNA synthetase. (492 aa)
	SDX22769.1	Nucleotide-binding universal stress protein, UspA family. (147 aa)
	queC-2	preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (231 aa)
	SDX25545.1	Nucleotide-binding universal stress protein, UspA family. (149 aa)
	SDX31861.1	Hypothetical protein. (249 aa)
	SDX33106.1	Universal stress protein family protein. (169 aa)
	SDX36683.1	Nucleotide-binding universal stress protein, UspA family. (279 aa)
	SDX37245.1	Nucleotide-binding universal stress protein, UspA family. (150 aa)
	SDX38958.1	Nucleotide-binding universal stress protein, UspA family. (149 aa)
	SDX05831.1	Asparagine synthase (glutamine-hydrolysing). (608 aa)
	ribL	FMN adenylyltransferase; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme. (142 aa)
	SDX02082.1	Nucleotide-binding universal stress protein, UspA family. (138 aa)
	SDX04150.1	Nucleotide-binding universal stress protein, UspA family. (162 aa)

Your Current Organism:

Haloarcula vallismortis

NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDW03823.1	SDW23068.1	SAMN05443574_101134	SAMN05443574_10266	Nucleotide-binding universal stress protein, UspA family.	Nucleotide-binding universal stress protein, UspA family.	0.519
SDW03823.1	SDW64630.1	SAMN05443574_101134	SAMN05443574_105184	Nucleotide-binding universal stress protein, UspA family.	Universal stress protein family protein.	0.553
SDW03823.1	SDX37245.1	SAMN05443574_101134	SAMN05443574_1389	Nucleotide-binding universal stress protein, UspA family.	Nucleotide-binding universal stress protein, UspA family.	0.543
SDW04328.1	SDW04362.1	SAMN05443574_101154	SAMN05443574_101155	Electron transfer flavoprotein alpha subunit apoprotein.	Electron transfer flavoprotein beta subunit.	0.999
SDW04328.1	SDW72060.1	SAMN05443574_101154	SAMN05443574_10645	Electron transfer flavoprotein alpha subunit apoprotein.	Electron transfer flavoprotein beta subunit.	0.999
SDW04362.1	SDW04328.1	SAMN05443574_101155	SAMN05443574_101154	Electron transfer flavoprotein beta subunit.	Electron transfer flavoprotein alpha subunit apoprotein.	0.999
SDW04362.1	SDW72060.1	SAMN05443574_101155	SAMN05443574_10645	Electron transfer flavoprotein beta subunit.	Electron transfer flavoprotein beta subunit.	0.664
SDW04362.1	SDW72086.1	SAMN05443574_101155	SAMN05443574_10646	Electron transfer flavoprotein beta subunit.	Electron transfer flavoprotein alpha subunit apoprotein.	0.993
SDW04952.1	SDX36683.1	SAMN05443574_101176	SAMN05443574_13711	Nucleotide-binding universal stress protein, UspA family.	Nucleotide-binding universal stress protein, UspA family.	0.481
SDW10669.1	SDX25545.1	SAMN05443574_101380	SAMN05443574_12222	Nucleotide-binding universal stress protein, UspA family.	Nucleotide-binding universal stress protein, UspA family.	0.431
SDW13907.1	SDW13930.1	SAMN05443574_101483	SAMN05443574_101484	Nucleotide-binding universal stress protein, UspA family.	Nucleotide-binding universal stress protein, UspA family.	0.594
SDW13907.1	SDX16429.1	SAMN05443574_101483	SAMN05443574_11668	Nucleotide-binding universal stress protein, UspA family.	Nucleotide-binding universal stress protein, UspA family.	0.608
SDW13930.1	SDW13907.1	SAMN05443574_101484	SAMN05443574_101483	Nucleotide-binding universal stress protein, UspA family.	Nucleotide-binding universal stress protein, UspA family.	0.594
SDW22983.1	SDW23004.1	SAMN05443574_10263	SAMN05443574_10264	Nucleotide-binding universal stress protein, UspA family.	Nucleotide-binding universal stress protein, UspA family.	0.638
SDW23004.1	SDW22983.1	SAMN05443574_10264	SAMN05443574_10263	Nucleotide-binding universal stress protein, UspA family.	Nucleotide-binding universal stress protein, UspA family.	0.638
SDW23068.1	SDW03823.1	SAMN05443574_10266	SAMN05443574_101134	Nucleotide-binding universal stress protein, UspA family.	Nucleotide-binding universal stress protein, UspA family.	0.519
SDW23068.1	SDW64630.1	SAMN05443574_10266	SAMN05443574_105184	Nucleotide-binding universal stress protein, UspA family.	Universal stress protein family protein.	0.530
SDW23068.1	SDX09017.1	SAMN05443574_10266	SAMN05443574_11423	Nucleotide-binding universal stress protein, UspA family.	Nucleotide-binding universal stress protein, UspA family.	0.571
SDW24644.1	SDW50316.1	SAMN05443574_102116	SAMN05443574_10443	Pantetheine-phosphate adenylyltransferase.	Pantetheine-phosphate adenylyltransferase.	0.938
SDW32575.1	SDX18540.1	SAMN05443574_102429	SAMN05443574_11751	leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.657

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