(5 nodes) Oligopeptide/dipeptide transporter, C-terminal region network (Haloarcula vallismortis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SDX37196.1	Peptide/nickel transport system ATP-binding protein. (699 aa)
	SDW40456.1	Peptide/nickel transport system ATP-binding protein. (399 aa)
	SDW40423.1	Peptide/nickel transport system ATP-binding protein. (438 aa)
	SDW08236.1	Peptide/nickel transport system ATP-binding protein. (406 aa)
	SDW08176.1	Peptide/nickel transport system ATP-binding protein. (208 aa)

Your Current Organism:

Haloarcula vallismortis

NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDW08176.1	SDW08236.1	SAMN05443574_101291	SAMN05443574_101293	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.906
SDW08176.1	SDW40423.1	SAMN05443574_101291	SAMN05443574_103107	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.657
SDW08176.1	SDW40456.1	SAMN05443574_101291	SAMN05443574_103108	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.774
SDW08176.1	SDX37196.1	SAMN05443574_101291	SAMN05443574_1387	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.434
SDW08236.1	SDW08176.1	SAMN05443574_101293	SAMN05443574_101291	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.906
SDW08236.1	SDW40423.1	SAMN05443574_101293	SAMN05443574_103107	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.647
SDW08236.1	SDX37196.1	SAMN05443574_101293	SAMN05443574_1387	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.864
SDW40423.1	SDW08176.1	SAMN05443574_103107	SAMN05443574_101291	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.657
SDW40423.1	SDW08236.1	SAMN05443574_103107	SAMN05443574_101293	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.647
SDW40423.1	SDW40456.1	SAMN05443574_103107	SAMN05443574_103108	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.918
SDW40423.1	SDX37196.1	SAMN05443574_103107	SAMN05443574_1387	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.937
SDW40456.1	SDW08176.1	SAMN05443574_103108	SAMN05443574_101291	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.774
SDW40456.1	SDW40423.1	SAMN05443574_103108	SAMN05443574_103107	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.918
SDW40456.1	SDX37196.1	SAMN05443574_103108	SAMN05443574_1387	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.863
SDX37196.1	SDW08176.1	SAMN05443574_1387	SAMN05443574_101291	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.434
SDX37196.1	SDW08236.1	SAMN05443574_1387	SAMN05443574_101293	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.864
SDX37196.1	SDW40423.1	SAMN05443574_1387	SAMN05443574_103107	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.937
SDX37196.1	SDW40456.1	SAMN05443574_1387	SAMN05443574_103108	Peptide/nickel transport system ATP-binding protein.	Peptide/nickel transport system ATP-binding protein.	0.863

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