(127 nodes) Quorum sensing network (Haloarcula vallismortis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SDW99985.1	FtsX-like permease family protein. (1021 aa)
	SDW99403.1	Transcriptional regulator, PadR family. (91 aa)
	SDW93469.1	Hypothetical protein. (275 aa)
	SDW96326.1	Flagellar protein FlaI. (559 aa)
	SDW92046.1	Mechanosensitive ion channel. (264 aa)
	SDW86657.1	Hemerythrin-like metal-binding domain protein. (611 aa)
	SDW85733.1	Subtilase family protein. (433 aa)
	SDW85498.1	Anthranilate synthase, component II. (190 aa)
	SDW85479.1	Aminodeoxychorismate synthase, subunit I. (502 aa)
	SDW82112.1	Glyoxylase, beta-lactamase superfamily II. (302 aa)
	SDW77091.1	Small-conductance mechanosensitive channel. (349 aa)
	SDW76956.1	Mechanosensitive ion channel. (177 aa)
	SDW76232.1	Hypothetical protein. (498 aa)
	SDW76076.1	Cationic amino acid:proton symporter, ABT family. (484 aa)
	SDW75794.1	Predicted acyltransferase, contains DUF342 domain. (366 aa)
	SDW62194.1	Amino acid/polyamine/organocation transporter, APC superfamily. (734 aa)
	SDW66426.1	Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. (621 aa)
	SDW65281.1	Phenazine biosynthesis protein PhzF family. (303 aa)
	SDW63984.1	Cysteine-rich secretory protein family protein. (248 aa)
	SDW63896.1	Small-conductance mechanosensitive channel. (407 aa)
	secY	Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (487 aa)
	SDW51482.1	Amino acid/amide ABC transporter membrane protein 1, HAAT family. (371 aa)
	SDW51456.1	Amino acid/amide ABC transporter membrane protein 2, HAAT family. (427 aa)
	SDW51428.1	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (276 aa)
	SDW51394.1	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (251 aa)
	SDW51372.1	Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (455 aa)
	SDW39215.1	PKD domain-containing protein. (474 aa)
	SDW23204.1	Peptide/nickel transport system ATP-binding protein. (890 aa)
	SDW23230.1	Peptide/nickel transport system substrate-binding protein. (572 aa)
	SDW28380.1	Branched-chain amino acid transport system substrate-binding protein. (435 aa)
	SDW29132.1	Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. (292 aa)
	SDW22013.1	Flagellar protein FlaI. (557 aa)
	SDW30299.1	PGF-CTERM protein. (410 aa)
	SDW50747.1	PGF-CTERM protein. (338 aa)
	SDW57026.1	Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (470 aa)
	SDW57001.1	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (269 aa)
	SDW56972.1	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (232 aa)
	SDW56952.1	Amino acid/amide ABC transporter membrane protein 1, HAAT family. (329 aa)
	SDW56921.1	Amino acid/amide ABC transporter membrane protein 2, HAAT family. (387 aa)
	SDW56151.1	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (245 aa)
	SDW56126.1	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (251 aa)
	SDW56097.1	Amino acid/amide ABC transporter membrane protein 2, HAAT family. (382 aa)
	SDW56068.1	Amino acid/amide ABC transporter membrane protein 1, HAAT family. (314 aa)
	SDW56047.1	Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (449 aa)
	SDW54722.1	Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (412 aa)
	SDW54558.1	Aminodeoxychorismate synthase, subunit I. (489 aa)
	SDW54521.1	Aminodeoxychorismate synthase, glutamine amidotransferase subunit. (237 aa)
	SDW52969.1	Hypothetical protein. (251 aa)
	SDW52880.1	Transcriptional regulator, PadR family. (96 aa)
	SDW52728.1	PGF-pre-PGF domain-containing protein. (669 aa)
	SDW39690.1	Hypothetical protein. (121 aa)
	SDX37196.1	Peptide/nickel transport system ATP-binding protein. (699 aa)
	SDX37175.1	Peptide/nickel transport system permease protein. (306 aa)
	SDX37152.1	Peptide/nickel transport system permease protein. (331 aa)
	SDX37129.1	Peptide/nickel transport system substrate-binding protein. (643 aa)
	SDX36085.1	DNA-binding transcriptional regulator, PadR family. (98 aa)
	SDX32171.1	Long-chain acyl-CoA synthetase. (660 aa)
	SDX30862.1	Protein of unknown function. (412 aa)
	SDX30143.1	Transcriptional regulator, PadR family. (91 aa)
	SDX28919.1	Hypothetical protein. (329 aa)
	SDX29176.1	Transcriptional regulator PadR-like family protein. (90 aa)
	SDX28868.1	Helix-turn-helix domain-containing protein. (149 aa)
	SDX26657.1	Hypothetical protein. (427 aa)
	SDX25410.1	Nitrous oxidase accessory protein. (463 aa)
	SDX23869.1	Hypothetical protein. (162 aa)
	SDX21381.1	Transcriptional regulator PadR-like family protein. (137 aa)
	SDX21705.1	Hypothetical protein. (212 aa)
	SDX20595.1	Flagellar protein FlaI. (830 aa)
	SDX20400.1	fatty-acyl-CoA synthase. (550 aa)
	SDX20318.1	Metallo-beta-lactamase superfamily protein. (265 aa)
	SDX13363.1	Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (415 aa)
	SDX13339.1	Amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family. (674 aa)
	SDX13320.1	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (254 aa)
	SDX13302.1	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (240 aa)
	SDX12818.1	Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (414 aa)
	SDW40476.1	Peptide/nickel transport system permease protein. (345 aa)
	SDW40456.1	Peptide/nickel transport system ATP-binding protein. (399 aa)
	SDW40423.1	Peptide/nickel transport system ATP-binding protein. (438 aa)
	SDW23292.1	Peptide/nickel transport system permease protein. (309 aa)
	SDW23268.1	Peptide/nickel transport system permease protein. (360 aa)
	SDX12768.1	Branched-chain amino acid transport system permease protein. (365 aa)
	SDX12750.1	Amino acid/amide ABC transporter membrane protein 2, HAAT family. (435 aa)
	SDX10252.1	Mechanosensitive ion channel. (293 aa)
	ftsY	Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (429 aa)
	srp54	Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (469 aa)
	SDW03880.1	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (247 aa)
	SDW03907.1	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (252 aa)
	SDW03934.1	Amino acid/amide ABC transporter membrane protein 2, HAAT family. (363 aa)
	SDW03956.1	Amino acid/amide ABC transporter membrane protein 1, HAAT family. (319 aa)
	SDW04133.1	Micrococcal nuclease. (319 aa)
	SDW06152.1	Mechanosensitive ion channel. (369 aa)
	SDW07182.1	Alginate lyase. (432 aa)
	SDW08176.1	Peptide/nickel transport system ATP-binding protein. (208 aa)
	SDW08209.1	Peptide/nickel transport system ATP-binding protein. (217 aa)
	SDW08236.1	Peptide/nickel transport system ATP-binding protein. (406 aa)
	SDW08262.1	Peptide/nickel transport system permease protein. (488 aa)
	SDW08295.1	Peptide/nickel transport system permease protein. (346 aa)
	SDW08317.1	Peptide/nickel transport system substrate-binding protein. (615 aa)
	SDW08872.1	Transcriptional regulator, PadR family. (119 aa)
	SDW09281.1	Hypothetical protein. (172 aa)
	SDW01535.1	Ribonucrease Y. (226 aa)
	SDW10069.1	Mechanosensitive ion channel. (170 aa)
	SDW10416.1	Uncharacterized conserved protein. (626 aa)
	SDW01867.1	Hypothetical protein. (245 aa)
	SDW28285.1	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (240 aa)
	SDW28350.1	Amino acid/amide ABC transporter membrane protein 1, HAAT family. (305 aa)
	SDW32021.1	Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (451 aa)
	SDW40506.1	Peptide/nickel transport system permease protein. (317 aa)
	SDW40535.1	ABC-type transport system, substrate-binding protein. (624 aa)
	SDW41871.1	fatty-acyl-CoA synthase. (551 aa)
	SDW42554.1	Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase. (745 aa)
	SDW42750.1	Hypothetical protein. (170 aa)
	SDW42865.1	Peptide/nickel transport system substrate-binding protein. (594 aa)
	SDW38337.1	Uncharacterized conserved protein. (468 aa)
	SDX08987.1	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (249 aa)
	SDX08970.1	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (261 aa)
	SDX08947.1	Amino acid/amide ABC transporter membrane protein 2, HAAT family. (354 aa)
	SDX08919.1	Amino acid/amide ABC transporter membrane protein 1, HAAT family. (295 aa)
	SDX08902.1	Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (439 aa)
	SDX07400.1	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family. (268 aa)
	SDW03487.1	Hypothetical protein. (171 aa)
	SDX07374.1	Amino acid/amide ABC transporter membrane protein 2, HAAT family. (384 aa)
	SDX07362.1	Amino acid/amide ABC transporter membrane protein 1, HAAT family. (312 aa)
	SDX06814.1	Parallel beta-helix repeat (two copies). (637 aa)
	SDX06152.1	Uncharacterized conserved protein. (644 aa)
	SDX02346.1	Anthranilate synthase, component II. (207 aa)
	trpE	Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...] (537 aa)

Your Current Organism:

Haloarcula vallismortis

NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDW03880.1	SDW03907.1	SAMN05443574_101136	SAMN05443574_101137	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.	0.914
SDW03880.1	SDW03934.1	SAMN05443574_101136	SAMN05443574_101138	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter membrane protein 2, HAAT family.	0.997
SDW03880.1	SDW03956.1	SAMN05443574_101136	SAMN05443574_101139	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter membrane protein 1, HAAT family.	0.976
SDW03880.1	SDW28285.1	SAMN05443574_101136	SAMN05443574_102258	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	0.564
SDW03880.1	SDW28350.1	SAMN05443574_101136	SAMN05443574_102261	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter membrane protein 1, HAAT family.	0.836
SDW03880.1	SDW28380.1	SAMN05443574_101136	SAMN05443574_102262	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Branched-chain amino acid transport system substrate-binding protein.	0.753
SDW03880.1	SDW51372.1	SAMN05443574_101136	SAMN05443574_10481	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family.	0.414
SDW03880.1	SDW51394.1	SAMN05443574_101136	SAMN05443574_10482	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	0.567
SDW03880.1	SDW51428.1	SAMN05443574_101136	SAMN05443574_10483	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.	0.571
SDW03880.1	SDW51456.1	SAMN05443574_101136	SAMN05443574_10484	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter membrane protein 2, HAAT family.	0.901
SDW03880.1	SDW51482.1	SAMN05443574_101136	SAMN05443574_10485	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter membrane protein 1, HAAT family.	0.846
SDW03880.1	SDW54722.1	SAMN05443574_101136	SAMN05443574_104197	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family.	0.754
SDW03880.1	SDW56047.1	SAMN05443574_101136	SAMN05443574_104246	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family.	0.414
SDW03880.1	SDW56068.1	SAMN05443574_101136	SAMN05443574_104247	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter membrane protein 1, HAAT family.	0.796
SDW03880.1	SDW56097.1	SAMN05443574_101136	SAMN05443574_104248	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter membrane protein 2, HAAT family.	0.980
SDW03880.1	SDW56126.1	SAMN05443574_101136	SAMN05443574_104249	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.	0.623
SDW03880.1	SDW56151.1	SAMN05443574_101136	SAMN05443574_104250	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	0.568
SDW03880.1	SDW56921.1	SAMN05443574_101136	SAMN05443574_104281	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter membrane protein 2, HAAT family.	0.921
SDW03880.1	SDW56952.1	SAMN05443574_101136	SAMN05443574_104282	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter membrane protein 1, HAAT family.	0.823
SDW03880.1	SDW57001.1	SAMN05443574_101136	SAMN05443574_104284	Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.	Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.	0.707

page 1 of 85

Server load: low (16%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About