Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDW39450.1 | SDW65977.1 | SAMN05443574_10376 | SAMN05443574_105230 | Ribonuclease R. | Uncharacterized protein. | 0.561 |
| SDW39450.1 | dnaK | SAMN05443574_10376 | SAMN05443574_101335 | Ribonuclease R. | Molecular chaperone DnaK; Acts as a chaperone. | 0.696 |
| SDW39450.1 | eno | SAMN05443574_10376 | SAMN05443574_10627 | Ribonuclease R. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.527 |
| SDW39450.1 | fau-1 | SAMN05443574_10376 | SAMN05443574_10337 | Ribonuclease R. | RNA-binding protein AU-1; Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences. | 0.565 |
| SDW39450.1 | grpE | SAMN05443574_10376 | SAMN05443574_101336 | Ribonuclease R. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.532 |
| SDW39450.1 | ppk | SAMN05443574_10376 | SAMN05443574_10838 | Ribonuclease R. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP); Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.435 |
| SDW39450.1 | rnj | SAMN05443574_10376 | SAMN05443574_10636 | Ribonuclease R. | Ribonuclease J; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.470 |
| SDW65813.1 | dnaK | SAMN05443574_105224 | SAMN05443574_101335 | Thermosome subunit; Belongs to the TCP-1 chaperonin family. | Molecular chaperone DnaK; Acts as a chaperone. | 0.906 |
| SDW65813.1 | grpE | SAMN05443574_105224 | SAMN05443574_101336 | Thermosome subunit; Belongs to the TCP-1 chaperonin family. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.879 |
| SDW65977.1 | SDW39450.1 | SAMN05443574_105230 | SAMN05443574_10376 | Uncharacterized protein. | Ribonuclease R. | 0.561 |
| SDW65977.1 | rnj | SAMN05443574_105230 | SAMN05443574_10636 | Uncharacterized protein. | Ribonuclease J; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.617 |
| SDW90853.1 | SDW90882.1 | SAMN05443574_10972 | SAMN05443574_10973 | Ca-activated chloride channel family protein. | Protein kinase/serine/threonine protein kinase. | 0.918 |
| SDW90853.1 | dnaK | SAMN05443574_10972 | SAMN05443574_101335 | Ca-activated chloride channel family protein. | Molecular chaperone DnaK; Acts as a chaperone. | 0.596 |
| SDW90882.1 | SDW90853.1 | SAMN05443574_10973 | SAMN05443574_10972 | Protein kinase/serine/threonine protein kinase. | Ca-activated chloride channel family protein. | 0.918 |
| SDW90882.1 | dnaK | SAMN05443574_10973 | SAMN05443574_101335 | Protein kinase/serine/threonine protein kinase. | Molecular chaperone DnaK; Acts as a chaperone. | 0.896 |
| SDW90882.1 | eno | SAMN05443574_10973 | SAMN05443574_10627 | Protein kinase/serine/threonine protein kinase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.403 |
| SDX15983.1 | dnaK | SAMN05443574_11644 | SAMN05443574_101335 | Chaperonin GroEL (HSP60 family); Belongs to the TCP-1 chaperonin family. | Molecular chaperone DnaK; Acts as a chaperone. | 0.906 |
| SDX15983.1 | grpE | SAMN05443574_11644 | SAMN05443574_101336 | Chaperonin GroEL (HSP60 family); Belongs to the TCP-1 chaperonin family. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.879 |
| SDX17539.1 | dnaK | SAMN05443574_1171 | SAMN05443574_101335 | Thermosome subunit; Belongs to the TCP-1 chaperonin family. | Molecular chaperone DnaK; Acts as a chaperone. | 0.906 |
| SDX17539.1 | grpE | SAMN05443574_1171 | SAMN05443574_101336 | Thermosome subunit; Belongs to the TCP-1 chaperonin family. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.879 |
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