STRINGSTRING
KLLA0_E20505g KLLA0_E20505g KLLA0_B00627g KLLA0_B00627g KLLA0_D09284g KLLA0_D09284g KLLA0_B08910g KLLA0_B08910g KLLA0_C02629g KLLA0_C02629g PRP28 PRP28 KLLA0_C17798g KLLA0_C17798g KLLA0_D17160g KLLA0_D17160g KLLA0_A06688g KLLA0_A06688g KLLA0_D07678g KLLA0_D07678g KLLA0_E04929g KLLA0_E04929g KLLA0_A02299g KLLA0_A02299g KLLA0_A05280g KLLA0_A05280g
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KLLA0_E20505gKLLA0E20505p. (357 aa)
KLLA0_B00627gKLLA0B00627p. (191 aa)
KLLA0_D09284gSmall nuclear ribonucleoprotein Sm D2. (110 aa)
KLLA0_B08910gSpliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
KLLA0_C02629gKLLA0C02629p. (325 aa)
PRP28Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing (By similarity). (539 aa)
KLLA0_C17798gKLLA0C17798p. (2149 aa)
KLLA0_D17160gSmall nuclear ribonucleoprotein Sm D3. (100 aa)
KLLA0_A06688gKLLA0A06688p. (933 aa)
KLLA0_D07678gSmall nuclear ribonucleoprotein G. (73 aa)
KLLA0_E04929gKLLA0E04929p. (112 aa)
KLLA0_A02299gSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (93 aa)
KLLA0_A05280gKLLA0A05280p. (2411 aa)
Your Current Organism:
Kluyveromyces lactis
NCBI taxonomy Id: 284590
Other names: K. lactis NRRL Y-1140, Kluyveromyces lactis NRRL Y-1140
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