STRINGSTRING
KLLA0_D03674g KLLA0_D03674g RGR1 RGR1 KLLA0_D06699g KLLA0_D06699g KLLA0_D06765g KLLA0_D06765g KLLA0_D06831g KLLA0_D06831g KLLA0_D07139g KLLA0_D07139g KLLA0_D08008g KLLA0_D08008g KLLA0_D09625g KLLA0_D09625g KLLA0_D10219g KLLA0_D10219g KLLA0_D10461g KLLA0_D10461g BUR1 BUR1 SRB4 SRB4 KLLA0_D12408g KLLA0_D12408g SRB5 SRB5 SRB6 SRB6 KLLA0_D16170g KLLA0_D16170g KLLA0_D16368g KLLA0_D16368g KLLA0_D17204g KLLA0_D17204g KLLA0_D18029g KLLA0_D18029g KLLA0_D18689g KLLA0_D18689g RTT106 RTT106 SSU72 SSU72 KLLA0_D19646g KLLA0_D19646g SIN4 SIN4 KLLA0_E01915g KLLA0_E01915g KLLA0_E01981g KLLA0_E01981g KLLA0_C13167g KLLA0_C13167g KLLA0_E14785g KLLA0_E14785g SPT3 SPT3 GAL11 GAL11 SUA7 SUA7 KLLA0_F27291g KLLA0_F27291g KLLA0_F25828g KLLA0_F25828g KLLA0_F25003g KLLA0_F25003g KLLA0_F24838g KLLA0_F24838g DBP2 DBP2 KLLA0_F23353g KLLA0_F23353g KLLA0_F21868g KLLA0_F21868g RPB5 RPB5 KLLA0_F20526g KLLA0_F20526g KLLA0_F20361g KLLA0_F20361g MED4 MED4 KLLA0_F17523g KLLA0_F17523g KLLA0_F17413g KLLA0_F17413g CCR4 CCR4 KLLA0_F15411g KLLA0_F15411g KLLA0_F14487g KLLA0_F14487g KLLA0_F13728g KLLA0_F13728g KLLA0_F13442g KLLA0_F13442g BUR2 BUR2 KLLA0_F10659g KLLA0_F10659g KLLA0_F09361g KLLA0_F09361g RAT1 RAT1 KLLA0_F06710g KLLA0_F06710g CSE2 CSE2 KLLA0_F05071g KLLA0_F05071g KLLA0_F04521g KLLA0_F04521g KLLA0_F02387g KLLA0_F02387g KLLA0_F01925g KLLA0_F01925g TFB2 TFB2 KLLA0_F00748g KLLA0_F00748g MED8 MED8 KLLA0_E23453g KLLA0_E23453g SUB2 SUB2 HIR2 HIR2 KLLA0_E19229g KLLA0_E19229g KLLA0_E18657g KLLA0_E18657g KLLA0_E18195g KLLA0_E18195g KLLA0_E16567g KLLA0_E16567g EAF3 EAF3 KLLA0_E13025g KLLA0_E13025g RAI1 RAI1 KLLA0_E10099g KLLA0_E10099g KLLA0_E09615g KLLA0_E09615g INO80 INO80 NUT1 NUT1 MED7 MED7 ROX3 ROX3 KLLA0_E06689g KLLA0_E06689g KLLA0_E06315g KLLA0_E06315g KLLA0_E04137g KLLA0_E04137g KLLA0_E02311g KLLA0_E02311g KLLA0_E02047g KLLA0_E02047g KLLA0_B05555g KLLA0_B05555g KLLA0_B05577g KLLA0_B05577g KLLA0_B08305g KLLA0_B08305g TFB4 TFB4 KLLA0_B09196g KLLA0_B09196g SUS1 SUS1 MED1 MED1 KLLA0_B10351g KLLA0_B10351g KLLA0_B10472g KLLA0_B10472g NUT2 NUT2 SPT6 SPT6 KLLA0_B13211g KLLA0_B13211g KLLA0_C00913g KLLA0_C00913g KLLA0_C02189g KLLA0_C02189g KLLA0_C02893g KLLA0_C02893g YSH1 YSH1 UBC2 UBC2 KLLA0_C05676g KLLA0_C05676g SOH1 SOH1 TAF4 TAF4 KLLA0_C06116g KLLA0_C06116g KLLA0_C06160g KLLA0_C06160g KLLA0_C06611g KLLA0_C06611g KLLA0_C06787g KLLA0_C06787g MED6 MED6 CFT1 CFT1 SRB2 SRB2 TFB5 TFB5 KLLA0_C11935g KLLA0_C11935g KLLA0_C12507g KLLA0_C12507g KLLA0_C12815g KLLA0_C12815g KLLA0_C14630g KLLA0_C14630g SRB7 SRB7 TFB3 TFB3 KLLA0_C17578g KLLA0_C17578g KLLA0_C17776g KLLA0_C17776g KLLA0_C18194g KLLA0_C18194g SFH1 SFH1 KLLA0_C18612g KLLA0_C18612g KLLA0_C18821g KLLA0_C18821g KLLA0_D03036g KLLA0_D03036g KLLA0_D03234g KLLA0_D03234g KLLA0_A00737g KLLA0_A00737g KLLA0_A02959g KLLA0_A02959g KLLA0_A03663g KLLA0_A03663g HIR1 HIR1 KLLA0_A05247g KLLA0_A05247g KLLA0_A05797g KLLA0_A05797g KLLA0_A05951g KLLA0_A05951g SET2 SET2 KLLA0_A09251g KLLA0_A09251g KLLA0_A09427g KLLA0_A09427g KLLA0_A10021g KLLA0_A10021g KLLA0_A10219g KLLA0_A10219g KLLA0_A11594g KLLA0_A11594g KLLA0_B01067g KLLA0_B01067g BRE1 BRE1 KLLA0_B03476g KLLA0_B03476g HIR3 HIR3
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
KLLA0_D03674gKLLA0D03674p. (453 aa)
RGR1Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (998 aa)
KLLA0_D06699gKLLA0D06699p. (70 aa)
KLLA0_D06765gKLLA0D06765p. (473 aa)
KLLA0_D06831gKLLA0D06831p. (256 aa)
KLLA0_D07139gDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (145 aa)
KLLA0_D08008gKLLA0D08008p. (70 aa)
KLLA0_D09625gKLLA0D09625p. (245 aa)
KLLA0_D10219gKLLA0D10219p. (159 aa)
KLLA0_D10461gKLLA0D10461p. (564 aa)
BUR1Serine/threonine-protein kinase BUR1; Serine/threonine-protein kinase involved in transcription regulation. Phosphorylates the UBC2/RAD6 ubiquitin-conjugating enzyme (E2), leading to monoubiquitination of histone H2B and the silencing of telomeric-associated genes. Also required for histone H3 methylation. Necessary for the recovery from pheromone-induced growth arrest in the cell cycle G1 phase (By similarity). (645 aa)
SRB4Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (671 aa)
KLLA0_D12408gKLLA0D12408p. (184 aa)
SRB5Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (255 aa)
SRB6Mediator of RNA polymerase II transcription subunit 22; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (121 aa)
KLLA0_D16170gKLLA0D16170p. (307 aa)
KLLA0_D16368gKLLA0D16368p. (511 aa)
KLLA0_D17204gTranscription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (192 aa)
KLLA0_D18029gKLLA0D18029p. (244 aa)
KLLA0_D18689gKLLA0D18689p. (465 aa)
RTT106Histone chaperone RTT106; Histones H3 and H4 chaperone involved in the nucleosome formation and heterochromatin silencing. Required for the deposition of H3K56ac-carrying H3-H4 complex onto newly-replicated DNA. Plays a role in the transcriptional regulation of the cell-cycle dependent histone genes by creating a repressive structure at the core histone gene promoter (By similarity). (459 aa)
SSU72RNA polymerase II subunit A C-terminal domain phosphatase SSU72; Processively dephosphorylates Ser-5 of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (RPB1); Belongs to the SSU72 phosphatase family. (207 aa)
KLLA0_D19646gKLLA0D19646p. (314 aa)
SIN4Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (956 aa)
KLLA0_E01915gKLLA0E01915p. (1073 aa)
KLLA0_E01981gHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (432 aa)
KLLA0_C13167gKLLA0C13167p. (339 aa)
KLLA0_E14785gKLLA0E14785p. (310 aa)
SPT3Protein SPT3; SPT factors 3, 7 and 8 are required for the initiation of Ty transcription from the delta promoter. SPT3 regulates Ty1 as well as the mating factor genes. Interacts directly with TATA-binding protein. It is likely to be required for normal TBP function at a subset of RNA polymerase II-dependent promoters. (328 aa)
GAL11Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). Required [...] (1034 aa)
SUA7Transcription initiation factor IIB; General factor that plays a major role in the activation of eukaryotic genes transcribed by RNA polymerase II. (357 aa)
KLLA0_F27291gKLLA0F27291p. (349 aa)
KLLA0_F25828gKLLA0F25828p. (623 aa)
KLLA0_F25003gKLLA0F25003p. (132 aa)
KLLA0_F24838gKLLA0F24838p. (1062 aa)
DBP2ATP-dependent RNA helicase DBP2; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. (554 aa)
KLLA0_F23353gKLLA0F23353p. (281 aa)
KLLA0_F21868gTranscription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (171 aa)
RPB5DNA-directed RNA polymerases I, II, and III subunit RPABC1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, RPB5 is part of the lower [...] (215 aa)
KLLA0_F20526gKLLA0F20526p. (414 aa)
KLLA0_F20361gKLLA0F20361p. (447 aa)
MED4Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (285 aa)
KLLA0_F17523gKLLA0F17523p. (855 aa)
KLLA0_F17413gKLLA0F17413p. (502 aa)
CCR4Glucose-repressible alcohol dehydrogenase transcriptional effector; Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover. Ccr4 has 3'-5' RNase activity with a strong preference for polyadenylated substrates and also low exonuclease activity towards single-stranded DNA. Discovered because of its role in the control of ADH2 gene expression. It is required for the expression of genes involved in non-fermentative growth (By similarity); Belongs to [...] (790 aa)
KLLA0_F15411gTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (686 aa)
KLLA0_F14487gKLLA0F14487p. (302 aa)
KLLA0_F13728gKLLA0F13728p. (420 aa)
KLLA0_F13442gKLLA0F13442p. (587 aa)
BUR2Protein BUR2; Component of the BUR kinase complex involved in transcription regulation. This complex phosphorylates the UBC2/RAD6 ubiquitin- conjugating enzyme (E2), leading to monoubiquitination of histone H2B and the silencing of telomeric-associated genes. Also required for histone H3 methylation. Necessary for the recovery from pheromone- induced growth arrest in the cell cycle G1 phase. The kinase activity of the complex requires the presence of BUR2. Overexpression of BUR2 interferes with mitotic chromosome segregation (By similarity). (394 aa)
KLLA0_F10659gKLLA0F10659p. (516 aa)
KLLA0_F09361gKLLA0F09361p. (292 aa)
RAT15'-3' exoribonuclease 2; Possesses 5'->3' exoribonuclease activity. Required for the processing of nuclear mRNA and rRNA precursors. May promote termination of transcription by RNA polymerase II (By similarity); Belongs to the 5'-3' exonuclease family. XRN2/RAT1 subfamily. (992 aa)
KLLA0_F06710gKLLA0F06710p. (1096 aa)
CSE2Mediator of RNA polymerase II transcription subunit 9; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (123 aa)
KLLA0_F05071gDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1720 aa)
KLLA0_F04521gKLLA0F04521p. (1344 aa)
KLLA0_F02387gKLLA0F02387p. (727 aa)
KLLA0_F01925gKLLA0F01925p. (428 aa)
TFB2General transcription and DNA repair factor IIH subunit TFB2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has be [...] (496 aa)
KLLA0_F00748gKLLA0F00748p. (229 aa)
MED8Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (215 aa)
KLLA0_E23453gKLLA0E23453p. (826 aa)
SUB2ATP-dependent RNA helicase SUB2; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity); Belongs to the DEAD box helicase family. DECD subfamily. (437 aa)
HIR2Protein HIR2; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (847 aa)
KLLA0_E19229gKLLA0E19229p. (739 aa)
KLLA0_E18657gKLLA0E18657p. (530 aa)
KLLA0_E18195gKLLA0E18195p. (1133 aa)
KLLA0_E16567gPeptidyl-prolyl cis-trans isomerase. (162 aa)
EAF3Chromatin modification-related protein EAF3; Involved in deacetylation of histones, chromatin assembly and chromosome segregation. May act as a transcriptional oscillator, directing histone deacetylases to specific chromosomal domains. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A. The NuA4 complex is also involved in DNA repair (By similarity). (358 aa)
KLLA0_E13025gKLLA0E13025p. (858 aa)
RAI1Decapping nuclease RAI1; Ribonuclease that specifically degrades pre-mRNAs with a defective 5' end cap and is part of a pre-mRNA capping quality control. Has decapping and pyrophosphohydrolase activities. Has decapping activity toward incomplete 5' end cap mRNAs such as unmethylated 5' end-capped RNA to release GpppN and 5' end monophosphate RNA. Also possesses RNA 5'-pyrophosphohydrolase activity by hydrolyzing the 5' end triphosphate to release pyrophosphates (By similarity). Belongs to the DXO/Dom3Z family. (384 aa)
KLLA0_E10099gKLLA0E10099p. (233 aa)
KLLA0_E09615gGeneral transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (488 aa)
INO80Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair. (1489 aa)
NUT1Mediator of RNA polymerase II transcription subunit 5; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (1067 aa)
MED7Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (213 aa)
ROX3Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (206 aa)
KLLA0_E06689gKLLA0E06689p; Belongs to the cyclin family. (398 aa)
KLLA0_E06315gKLLA0E06315p; Belongs to the actin family. (438 aa)
KLLA0_E04137gKLLA0E04137p. (552 aa)
KLLA0_E02311gKLLA0E02311p. (417 aa)
KLLA0_E02047gKLLA0E02047p. (730 aa)
KLLA0_B05555gKLLA0B05555p. (1997 aa)
KLLA0_B05577gDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1221 aa)
KLLA0_B08305gKLLA0B08305p. (735 aa)
TFB4General transcription and DNA repair factor IIH subunit TFB4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has be [...] (337 aa)
KLLA0_B09196gKLLA0B09196p. (590 aa)
SUS1Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex required for deubiquitination of [...] (96 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (426 aa)
KLLA0_B10351gKLLA0B10351p. (432 aa)
KLLA0_B10472gNuclear cap-binding protein subunit 2. (198 aa)
NUT2Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (161 aa)
SPT6Transcription elongation factor SPT6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression (By similarity); Belongs to the SPT6 family. (1460 aa)
KLLA0_B13211gKLLA0B13211p. (915 aa)
KLLA0_C00913gKLLA0C00913p. (474 aa)
KLLA0_C02189gKLLA0C02189p. (1380 aa)
KLLA0_C02893gKLLA0C02893p. (623 aa)
YSH1Endoribonuclease YSH1; Component of the cleavage factor I (CF I) involved in pre- mRNA 3'-end processing; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. CPSF2/YSH1 subfamily. (764 aa)
UBC2Ubiquitin-conjugating enzyme E2 2; Catalyzes the covalent attachment of ubiquitin to other proteins. Plays a role in transcription regulation by catalyzing the monoubiquitination of histone H2B to form H2BK123ub1. H2BK123ub1 gives a specific tag for epigenetic transcriptional activation and is also a prerequisite for H3K4me and H3K79me formation. Also involved in postreplication repair of UV-damaged DNA, in N-end rule-dependent protein degradation and in sporulation; Belongs to the ubiquitin-conjugating enzyme family. (164 aa)
KLLA0_C05676gKLLA0C05676p. (511 aa)
SOH1Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (124 aa)
TAF4Transcription initiation factor TFIID subunit 4; Functions as a component of the DNA-binding general transcription factor complex TFIID. Binding of TFIID to a promoter (with or without TATA element) is the initial step in pre-initiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modification (histone acetylation by TAF1), facilitation of DNA opening and initiation of tra [...] (366 aa)
KLLA0_C06116gDNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (785 aa)
KLLA0_C06160gKLLA0C06160p. (121 aa)
KLLA0_C06611gKLLA0C06611p. (153 aa)
KLLA0_C06787gKLLA0C06787p. (171 aa)
MED6Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (268 aa)
CFT1Protein CFT1; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation- dependent pre-mRNA 3'-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3'-end formation (By similarity); Belongs to the CFT1 family. (1300 aa)
SRB2Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (211 aa)
TFB5General transcription and DNA repair factor IIH subunit TFB5; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has be [...] (72 aa)
KLLA0_C11935gKLLA0C11935p. (150 aa)
KLLA0_C12507gKLLA0C12507p; Belongs to the actin family. (454 aa)
KLLA0_C12815gTranscription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (113 aa)
KLLA0_C14630gKLLA0C14630p. (620 aa)
SRB7Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). (143 aa)
TFB3RNA polymerase II transcription factor B subunit 3; Acts as component of the general transcription and DNA repair factor IIH (TFIIH or factor B), which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA. TFIIH as CTD kinase activity and DNA-dependent ATPase activity, and is essential for polymerase II transcription (By similarity). (318 aa)
KLLA0_C17578gKLLA0C17578p. (1525 aa)
KLLA0_C17776gKLLA0C17776p. (778 aa)
KLLA0_C18194gKLLA0C18194p. (388 aa)
SFH1Chromatin structure-remodeling complex subunit SFH1; Part of the chromatin structure-remodeling complex (RSC) which is involved in transcription regulation and nucleosome positioning. RSC is responsible for the transfer of a histone octamer from a nucleosome core particle to naked DNA. The reaction requires ATP and involves an activated RSC-nucleosome intermediate. Remodeling reaction also involves DNA translocation, DNA twist and conformational change. As a reconfigurer of centromeric and flanking nucleosomes, RSC complex is required both for proper kinetochore function in chromosome [...] (442 aa)
KLLA0_C18612gKLLA0C18612p. (2140 aa)
KLLA0_C18821gKLLA0C18821p. (447 aa)
KLLA0_D03036gKLLA0D03036p. (368 aa)
KLLA0_D03234gDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (122 aa)
KLLA0_A00737gKLLA0A00737p. (582 aa)
KLLA0_A02959gKLLA0A02959p. (559 aa)
KLLA0_A03663gKLLA0A03663p. (824 aa)
HIR1Protein HIR1; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (861 aa)
KLLA0_A05247gKLLA0A05247p. (259 aa)
KLLA0_A05797gKLLA0A05797p. (200 aa)
KLLA0_A05951gTranscription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (286 aa)
SET2Histone-lysine N-methyltransferase, H3 lysine-36 specific; Histone methyltransferase that trimethylates histone H3 'Lys- 36' forming H3K36me3. Involved in transcription elongation as well as in transcription repression; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. (702 aa)
KLLA0_A09251gKLLA0A09251p. (688 aa)
KLLA0_A09427gKLLA0A09427p. (1011 aa)
KLLA0_A10021gKLLA0A10021p. (1033 aa)
KLLA0_A10219gKLLA0A10219p. (475 aa)
KLLA0_A11594gKLLA0A11594p. (1530 aa)
KLLA0_B01067gKLLA0B01067p. (350 aa)
BRE1E3 ubiquitin-protein ligase BRE1; E3 ubiquitin-protein ligase that mediates monoubiquitination of histone H2B to form H2BK123ub1. H2BK123ub1 gives a specific tag for epigenetic transcriptional activation and is also a prerequisite for H3K4me and H3K79me formation; Belongs to the BRE1 family. (663 aa)
KLLA0_B03476gKLLA0B03476p. (158 aa)
HIR3Histone transcription regulator 3 homolog; Has a role in a nucleosome assembly pathway that is required for the integrity of heterochromatin and proper chromosome segregation. Belongs to the HIR3 family. (1651 aa)
Your Current Organism:
Kluyveromyces lactis
NCBI taxonomy Id: 284590
Other names: K. lactis NRRL Y-1140, Kluyveromyces lactis NRRL Y-1140
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