(20 nodes) Cytosolic large ribosomal subunit network (Kluyveromyces lactis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KLLA0_E06843g	KLLA0E06843p. (130 aa)
	KLLA0_E12453g	KLLA0E12453p. (189 aa)
	KLLA0_E00573g	KLLA0E00573p. (255 aa)
	KLLA0_F06831g	KLLA0F06831p; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	RPL30	60S ribosomal protein L30; Belongs to the eukaryotic ribosomal protein eL30 family. (105 aa)
	RPL25	60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family. (142 aa)
	RPL3	60S ribosomal protein L3. (387 aa)
	KLLA0_F07865g	KLLA0F07865p; Belongs to the eukaryotic ribosomal protein P1/P2 family. (106 aa)
	KLLA0_F06666g	KLLA0F06666p. (648 aa)
	KLLA0_F05555g	KLLA0F05555p; Belongs to the eukaryotic ribosomal protein P1/P2 family. (104 aa)
	KLLA0_F05247g	KLLA0F05247p. (120 aa)
	KLLA0_E22023g	KLLA0E22023p; Belongs to the eukaryotic ribosomal protein P1/P2 family. (106 aa)
	KLLA0_C18216g	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family. (78 aa)
	KLLA0_D03410g	KLLA0D03410p. (241 aa)
	KLLA0_D05181g	KLLA0D05181p. (122 aa)
	KLLA0_D05643g	KLLA0D05643p. (220 aa)
	KLLA0_D06941g	KLLA0D06941p. (297 aa)
	KLLA0_D16071g	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (62 aa)
	KLLA0_E02861g	KLLA0E02861p; Belongs to the eukaryotic ribosomal protein P1/P2 family. (109 aa)
	KLLA0_E05941g	KLLA0E05941p. (92 aa)

Your Current Organism:

Kluyveromyces lactis

NCBI taxonomy Id: 284590
Other names: K. lactis NRRL Y-1140, Kluyveromyces lactis NRRL Y-1140

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KLLA0_C18216g	KLLA0_D03410g	Q6CSS8	Q6CS71	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0D03410p.	0.999
KLLA0_C18216g	KLLA0_D05181g	Q6CSS8	Q6CRZ8	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0D05181p.	0.999
KLLA0_C18216g	KLLA0_D05643g	Q6CSS8	Q6CRX7	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0D05643p.	0.999
KLLA0_C18216g	KLLA0_D06941g	Q6CSS8	Q6CRR9	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0D06941p.	0.999
KLLA0_C18216g	KLLA0_D16071g	Q6CSS8	Q6CQM1	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
KLLA0_C18216g	KLLA0_E00573g	Q6CSS8	B4UN96	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0E00573p.	0.999
KLLA0_C18216g	KLLA0_E02861g	Q6CSS8	Q6CPR5	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0E02861p; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.977
KLLA0_C18216g	KLLA0_E05941g	Q6CSS8	Q6CPC5	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0E05941p.	0.999
KLLA0_C18216g	KLLA0_E06843g	Q6CSS8	Q6CP82	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0E06843p.	0.999
KLLA0_C18216g	KLLA0_E12453g	Q6CSS8	Q6CNH9	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0E12453p.	0.999
KLLA0_C18216g	KLLA0_E22023g	Q6CSS8	Q6CM91	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0E22023p; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.957
KLLA0_C18216g	KLLA0_F05247g	Q6CSS8	Q6CL71	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0F05247p.	0.999
KLLA0_C18216g	KLLA0_F05555g	Q6CSS8	Q6CL57	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0F05555p; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.955
KLLA0_C18216g	KLLA0_F06666g	Q6CSS8	Q6CL07	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0F06666p.	0.794
KLLA0_C18216g	KLLA0_F06831g	Q6CSS8	F2Z696	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0F06831p; Belongs to the universal ribosomal protein uL15 family.	0.999
KLLA0_C18216g	KLLA0_F07865g	Q6CSS8	Q6CKV3	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	KLLA0F07865p; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.977
KLLA0_C18216g	RPL25	Q6CSS8	P48045	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.	0.999
KLLA0_C18216g	RPL3	Q6CSS8	Q6CJR7	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	60S ribosomal protein L3.	0.999
KLLA0_C18216g	RPL30	Q6CSS8	P38664	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	60S ribosomal protein L30; Belongs to the eukaryotic ribosomal protein eL30 family.	0.999
KLLA0_D03410g	KLLA0_C18216g	Q6CS71	Q6CSS8	KLLA0D03410p.	KLLA0C18216p; Belongs to the eukaryotic ribosomal protein eL38 family.	0.999