23 items (Kluyveromyces lactis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KLLA0_C05192g	KLLA0C05192p. (189 aa)
	KLLA0_C03322g	KLLA0C03322p. (385 aa)
	KLLA0_B11594g	KLLA0B11594p. (114 aa)
	SNU71	U1 small nuclear ribonucleoprotein component SNU71; Component of the U1 snRNP particle, which recognizes and binds the 5'-splice site of pre-mRNA. Together with other non-snRNP factors, U1 snRNP forms the spliceosomal commitment complex, that targets pre-mRNA to the splicing pathway (By similarity). (568 aa)
	KLLA0_F24662g	KLLA0F24662p. (530 aa)
	KLLA0_F22473g	KLLA0F22473p. (253 aa)
	KLLA0_F14861g	KLLA0F14861p. (589 aa)
	KLLA0_F08481g	KLLA0F08481p. (483 aa)
	KLLA0_F07249g	KLLA0F07249p. (256 aa)
	KLLA0_E18239g	KLLA0E18239p. (571 aa)
	SYF2	Pre-mRNA-splicing factor SYF2; Involved in pre-mRNA splicing. (221 aa)
	KLLA0_D07678g	Small nuclear ribonucleoprotein G. (73 aa)
	KLLA0_C15323g	KLLA0C15323p. (462 aa)
	KLLA0_C15169g	KLLA0C15169p. (549 aa)
	KLLA0_C14388g	KLLA0C14388p. (203 aa)
	KLLA0_C08019g	KLLA0C08019p. (301 aa)
	KLLA0_B08976g	KLLA0B08976p. (305 aa)
	KLLA0_B02156g	KLLA0B02156p. (242 aa)
	KLLA0_B00627g	KLLA0B00627p. (191 aa)
	KLLA0_A09537g	KLLA0A09537p. (954 aa)
	RSE1	Pre-mRNA-splicing factor RSE1; Involved in pre-mRNA splicing and cell cycle control. (1269 aa)
	KLLA0_A08019g	KLLA0A08019p. (615 aa)
	KLLA0_A04565g	KLLA0A04565p. (189 aa)

Your Current Organism:

Kluyveromyces lactis

NCBI taxonomy Id: 284590
Other names: K. lactis NRRL Y-1140, Kluyveromyces lactis NRRL Y-1140

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KLLA0_A04565g	KLLA0_A08019g	Q6CXY9	Q6CXI2	KLLA0A04565p.	KLLA0A08019p.	0.876
KLLA0_A04565g	KLLA0_A09537g	Q6CXY9	Q6CXC2	KLLA0A04565p.	KLLA0A09537p.	0.920
KLLA0_A04565g	KLLA0_B00627g	Q6CXY9	Q6CWY1	KLLA0A04565p.	KLLA0B00627p.	0.925
KLLA0_A04565g	KLLA0_B02156g	Q6CXY9	Q6CWR2	KLLA0A04565p.	KLLA0B02156p.	0.838
KLLA0_A04565g	KLLA0_B08976g	Q6CXY9	Q6CVW1	KLLA0A04565p.	KLLA0B08976p.	0.870
KLLA0_A04565g	KLLA0_B11594g	Q6CXY9	Q6CVJ3	KLLA0A04565p.	KLLA0B11594p.	0.945
KLLA0_A04565g	KLLA0_C03322g	Q6CXY9	Q6CUP3	KLLA0A04565p.	KLLA0C03322p.	0.544
KLLA0_A04565g	KLLA0_C05192g	Q6CXY9	Q6CUF7	KLLA0A04565p.	KLLA0C05192p.	0.900
KLLA0_A04565g	KLLA0_C08019g	Q6CXY9	Q6CU32	KLLA0A04565p.	KLLA0C08019p.	0.919
KLLA0_A04565g	KLLA0_C14388g	Q6CXY9	Q6CT95	KLLA0A04565p.	KLLA0C14388p.	0.908
KLLA0_A04565g	KLLA0_C15169g	Q6CXY9	Q6CT59	KLLA0A04565p.	KLLA0C15169p.	0.879
KLLA0_A04565g	KLLA0_C15323g	Q6CXY9	Q6CT52	KLLA0A04565p.	KLLA0C15323p.	0.804
KLLA0_A04565g	KLLA0_D07678g	Q6CXY9	Q6CRN4	KLLA0A04565p.	Small nuclear ribonucleoprotein G.	0.956
KLLA0_A04565g	KLLA0_E18239g	Q6CXY9	Q6CMR6	KLLA0A04565p.	KLLA0E18239p.	0.844
KLLA0_A04565g	KLLA0_F07249g	Q6CXY9	Q6CKY0	KLLA0A04565p.	KLLA0F07249p.	0.880
KLLA0_A04565g	KLLA0_F08481g	Q6CXY9	Q6CKS4	KLLA0A04565p.	KLLA0F08481p.	0.891
KLLA0_A04565g	KLLA0_F14861g	Q6CXY9	Q6CJZ1	KLLA0A04565p.	KLLA0F14861p.	0.890
KLLA0_A04565g	KLLA0_F22473g	Q6CXY9	Q6CJ05	KLLA0A04565p.	KLLA0F22473p.	0.771
KLLA0_A04565g	KLLA0_F24662g	Q6CXY9	Q6CIR1	KLLA0A04565p.	KLLA0F24662p.	0.798
KLLA0_A04565g	RSE1	Q6CXY9	Q6CXH8	KLLA0A04565p.	Pre-mRNA-splicing factor RSE1; Involved in pre-mRNA splicing and cell cycle control.	0.885