STRINGSTRING
KLLA0_A02299g KLLA0_A02299g KLLA0_A11605g KLLA0_A11605g LSM4 LSM4 SPP381 SPP381 KLLA0_F14861g KLLA0_F14861g KLLA0_F09207g KLLA0_F09207g KLLA0_F08591g KLLA0_F08591g KLLA0_F08481g KLLA0_F08481g KLLA0_F04191g KLLA0_F04191g KLLA0_E22881g KLLA0_E22881g KLLA0_E20505g KLLA0_E20505g KLLA0_E16457g KLLA0_E16457g KLLA0_E14125g KLLA0_E14125g KLLA0_E10209g KLLA0_E10209g KLLA0_E09285g KLLA0_E09285g TRM13 TRM13 KLLA0_E04819g KLLA0_E04819g KLLA0_E03939g KLLA0_E03939g KLLA0_E01409g KLLA0_E01409g KLLA0_D13420g KLLA0_D13420g KLLA0_D07678g KLLA0_D07678g KLLA0_D03773g KLLA0_D03773g KLLA0_C18172g KLLA0_C18172g SNU71 SNU71 KLLA0_C17798g KLLA0_C17798g KLLA0_C15675g KLLA0_C15675g PRP28 PRP28 KLLA0_C15323g KLLA0_C15323g KLLA0_C14388g KLLA0_C14388g KLLA0_C08800g KLLA0_C08800g KLLA0_C05192g KLLA0_C05192g KLLA0_C02629g KLLA0_C02629g KLLA0_B08976g KLLA0_B08976g KLLA0_B08910g KLLA0_B08910g KLLA0_B02156g KLLA0_B02156g KLLA0_B00627g KLLA0_B00627g RSE1 RSE1 KLLA0_A05280g KLLA0_A05280g KLLA0_A04565g KLLA0_A04565g
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KLLA0_A02299gSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (93 aa)
KLLA0_A11605gKLLA0A11605p. (87 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (183 aa)
SPP381Pre-mRNA-splicing factor SPP381; Component of the spliceosome and rRNA processing machinery. In association with the spliceosomal U4/U6.U5 tri-snRNP particle, required for splicing of pre-mRNA (By similarity). (262 aa)
KLLA0_F14861gKLLA0F14861p. (589 aa)
KLLA0_F09207gU6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
KLLA0_F08591gKLLA0F08591p. (557 aa)
KLLA0_F08481gKLLA0F08481p. (483 aa)
KLLA0_F04191gKLLA0F04191p. (885 aa)
KLLA0_E22881gKLLA0E22881p. (110 aa)
KLLA0_E20505gKLLA0E20505p. (357 aa)
KLLA0_E16457gKLLA0E16457p. (96 aa)
KLLA0_E14125gKLLA0E14125p. (477 aa)
KLLA0_E10209gKLLA0E10209p. (84 aa)
KLLA0_E09285gKLLA0E09285p. (424 aa)
TRM13tRNA:m(4)X modification enzyme TRM13; tRNA methylase which 2'-O-methylates cytidine(4) in tRNA(Pro) and tRNA(Gly)(GCC), and adenosine(4) in tRNA(His). (434 aa)
KLLA0_E04819gKLLA0E04819p. (459 aa)
KLLA0_E03939gKLLA0E03939p. (435 aa)
KLLA0_E01409gKLLA0E01409p. (186 aa)
KLLA0_D13420gKLLA0D13420p. (166 aa)
KLLA0_D07678gSmall nuclear ribonucleoprotein G. (73 aa)
KLLA0_D03773gKLLA0D03773p. (141 aa)
KLLA0_C18172gKLLA0C18172p. (152 aa)
SNU71U1 small nuclear ribonucleoprotein component SNU71; Component of the U1 snRNP particle, which recognizes and binds the 5'-splice site of pre-mRNA. Together with other non-snRNP factors, U1 snRNP forms the spliceosomal commitment complex, that targets pre-mRNA to the splicing pathway (By similarity). (568 aa)
KLLA0_C17798gKLLA0C17798p. (2149 aa)
KLLA0_C15675gKLLA0C15675p. (111 aa)
PRP28Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing (By similarity). (539 aa)
KLLA0_C15323gKLLA0C15323p. (462 aa)
KLLA0_C14388gKLLA0C14388p. (203 aa)
KLLA0_C08800gKLLA0C08800p. (157 aa)
KLLA0_C05192gKLLA0C05192p. (189 aa)
KLLA0_C02629gKLLA0C02629p. (325 aa)
KLLA0_B08976gKLLA0B08976p. (305 aa)
KLLA0_B08910gSpliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
KLLA0_B02156gKLLA0B02156p. (242 aa)
KLLA0_B00627gKLLA0B00627p. (191 aa)
RSE1Pre-mRNA-splicing factor RSE1; Involved in pre-mRNA splicing and cell cycle control. (1269 aa)
KLLA0_A05280gKLLA0A05280p. (2411 aa)
KLLA0_A04565gKLLA0A04565p. (189 aa)
Your Current Organism:
Kluyveromyces lactis
NCBI taxonomy Id: 284590
Other names: K. lactis NRRL Y-1140, Kluyveromyces lactis NRRL Y-1140
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