STRINGSTRING
KLLA0_D16027g KLLA0_D16027g KLLA0_A02035g KLLA0_A02035g SPT5 SPT5 KLLA0_B03652g KLLA0_B03652g KLLA0_B04686g KLLA0_B04686g KLLA0_B05742g KLLA0_B05742g KLLA0_B13409g KLLA0_B13409g KLLA0_E22199g KLLA0_E22199g KLLA0_F22385g KLLA0_F22385g
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KLLA0_D16027gKLLA0D16027p. (254 aa)
KLLA0_A02035gKLLA0A02035p. (401 aa)
SPT5Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (By similarity). (1036 aa)
KLLA0_B03652g40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
KLLA0_B04686gKLLA0B04686p. (175 aa)
KLLA0_B05742gKLLA0B05742p. (127 aa)
KLLA0_B13409gKLLA0B13409p. (138 aa)
KLLA0_E22199gEukaryotic translation initiation factor 5A. (157 aa)
KLLA0_F22385g5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1453 aa)
Your Current Organism:
Kluyveromyces lactis
NCBI taxonomy Id: 284590
Other names: K. lactis NRRL Y-1140, Kluyveromyces lactis NRRL Y-1140
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