3 items (Kluyveromyces lactis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KLLA0_D17160g	Small nuclear ribonucleoprotein Sm D3. (100 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (183 aa)
	KLLA0_D03773g	KLLA0D03773p. (141 aa)

Your Current Organism:

Kluyveromyces lactis

NCBI taxonomy Id: 284590
Other names: K. lactis NRRL Y-1140, Kluyveromyces lactis NRRL Y-1140

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KLLA0_D03773g	KLLA0_D17160g	Q6CS56	Q6CQH0	KLLA0D03773p.	Small nuclear ribonucleoprotein Sm D3.	0.999
KLLA0_D03773g	LSM4	Q6CS56	F2Z6E8	KLLA0D03773p.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.961
KLLA0_D17160g	KLLA0_D03773g	Q6CQH0	Q6CS56	Small nuclear ribonucleoprotein Sm D3.	KLLA0D03773p.	0.999
KLLA0_D17160g	LSM4	Q6CQH0	F2Z6E8	Small nuclear ribonucleoprotein Sm D3.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
LSM4	KLLA0_D03773g	F2Z6E8	Q6CS56	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	KLLA0D03773p.	0.961
LSM4	KLLA0_D17160g	F2Z6E8	Q6CQH0	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D3.	0.996