STRINGSTRING
SEC22 SEC22 AGOS_AFL232W AGOS_AFL232W AGOS_AER438C AGOS_AER438C YKT6 YKT6 SEC17 SEC17
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SEC22Protein transport protein SEC22; Required for transport from the ER to the Golgi complex. Belongs to the synaptobrevin family. (214 aa)
AGOS_AFL232WAFL232Wp; Belongs to the syntaxin family. (274 aa)
AGOS_AER438CAER438Cp. (348 aa)
YKT6Synaptobrevin homolog YKT6. (200 aa)
SEC17Vesicular-fusion protein SEC17; Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus; Belongs to the SNAP family. (291 aa)
Your Current Organism:
Eremothecium gossypii
NCBI taxonomy Id: 284811
Other names: Ashbya gossypii ATCC 10895, E. gossypii ATCC 10895, Eremothecium gossypii ATCC 10895
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