STRINGSTRING
CLF1 CLF1 AGOS_AFR511C AGOS_AFR511C ISY1 ISY1 SYF2 SYF2 AGOS_AFR097W AGOS_AFR097W AGOS_AER255C AGOS_AER255C AGOS_AAR020W AGOS_AAR020W SYF1 SYF1 AGOS_AAR180C AGOS_AAR180C PRP46 PRP46 AGOS_ABR207W AGOS_ABR207W AGOS_AER107W AGOS_AER107W AGOS_AEL274C AGOS_AEL274C PRP45 PRP45 AGOS_ADR034W AGOS_ADR034W AGOS_ACR235W AGOS_ACR235W AGOS_AAL018W AGOS_AAL018W AGOS_AGR277W AGOS_AGR277W
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CLF1Pre-mRNA-splicing factor CLF1; Involved in pre-mRNA splicing and cell cycle progression. Required for the spliceosome assembly and initiation of the DNA replication (By similarity). (683 aa)
AGOS_AFR511CSmall nuclear ribonucleoprotein G. (76 aa)
ISY1Pre-mRNA-splicing factor ISY1; Involved in nuclear pre-mRNA splicing. (240 aa)
SYF2Pre-mRNA-splicing factor SYF2; Involved in pre-mRNA splicing. (192 aa)
AGOS_AFR097WAFR097Wp. (277 aa)
AGOS_AER255CAER255Cp. (467 aa)
AGOS_AAR020WAAR020Wp. (1111 aa)
SYF1Pre-mRNA-splicing factor SYF1; Involved in pre-mRNA splicing and cell cycle progression. (803 aa)
AGOS_AAR180CAAR180Cp. (766 aa)
PRP46Pre-mRNA-splicing factor PRP46; Involved in pre-mRNA splicing and required for cell cycle progression at G2/M. (425 aa)
AGOS_ABR207WABR207Wp. (2402 aa)
AGOS_AER107WAER107Wp. (636 aa)
AGOS_AEL274CAEL274Cp. (86 aa)
PRP45Pre-mRNA-processing protein 45; Involved in pre-mRNA splicing. (443 aa)
AGOS_ADR034WADR034Wp. (555 aa)
AGOS_ACR235WACR235Wp. (578 aa)
AGOS_AAL018WAAL018Wp. (337 aa)
AGOS_AGR277WSmall nuclear ribonucleoprotein Sm D2. (108 aa)
Your Current Organism:
Eremothecium gossypii
NCBI taxonomy Id: 284811
Other names: Ashbya gossypii ATCC 10895, E. gossypii ATCC 10895, Eremothecium gossypii ATCC 10895
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