STRINGSTRING
rbd1 rbd1 rbd2 rbd2 dsk1 dsk1 srp2 srp2 srp1 srp1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbd1Uncharacterized protein C13E7.11. (298 aa)
rbd2Rhomboid protein 2; Probable serine protease; Belongs to the peptidase S54 family. (251 aa)
dsk1Protein kinase dsk1; May play an important role in mitotic control by altering cellular location, degree of phosphorylation and kinase activity. Abundant expression accelerates the exit when cells are in M-phase and also delays the entry into mitosis when cells are in G2. Phosphorylates prp2 in vitro and so may have a role in co-ordinating pre-mRNA splicing with the progression of the cell division cycle. (544 aa)
srp2Pre-mRNA-splicing factor srp2; Has a role in pre-mRNA splicing where it is involved in spliceosome assembly. (365 aa)
srp1Pre-mRNA-splicing factor srp1; Has a role in pre-mRNA splicing where it is involved in spliceosome assembly. (275 aa)
Your Current Organism:
Schizosaccharomyces pombe
NCBI taxonomy Id: 284812
Other names: S. pombe 972h-, Schizosaccharomyces pombe 972h-
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