(55 nodes) ATP-binding cassette (ABC) transporter complex network (Streptomyces agglomeratus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OEJ57573.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	OEJ62853.1	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
	fbpC	ABC transporter; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (351 aa)
	OEJ57808.1	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
	OEJ57950.1	Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
	OEJ58121.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)
	OEJ58122.1	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
	OEJ62929.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)
	OEJ58196.1	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	OEJ58282.1	Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
	OEJ58394.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
	OEJ58528.1	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	OEJ58706.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
	OEJ58811.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
	OEJ58917.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	OEJ59004.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (374 aa)
	OEJ59006.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (359 aa)
	OEJ59119.1	Ectoine/hydroxyectoine ABC transporter permease subunit EhuC; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
	OEJ59120.1	Ectoine/hydroxyectoine ABC transporter permease subunit EhuD; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
	OEJ59135.1	2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (353 aa)
	OEJ59377.1	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
	OEJ59379.1	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
	OEJ59504.1	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
	OEJ63146.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (378 aa)
	OEJ59631.1	Phosphate ABC transporter substrate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (377 aa)
	OEJ59690.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	OEJ59812.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
	OEJ59930.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	OEJ60093.1	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
	OEJ60116.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	OEJ60153.1	Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
	OEJ60425.1	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	OEJ60459.1	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
	OEJ60562.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	OEJ60659.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (537 aa)
	OEJ60665.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)
	OEJ60784.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	OEJ60856.1	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
	OEJ60941.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)
	fbpC-2	Iron ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (341 aa)
	potA	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (383 aa)
	OEJ61176.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (615 aa)
	OEJ61227.1	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	OEJ61228.1	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
	OEJ61339.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
	OEJ61414.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)
	OEJ61657.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	OEJ61729.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
	OEJ62016.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (531 aa)
	OEJ62024.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
	BGM19_34055	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
	OEJ62299.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
	OEJ62330.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)
	OEJ62597.1	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
	OEJ56230.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)

Your Current Organism:

Streptomyces agglomeratus

NCBI taxonomy Id: 285458
Other names: S. agglomeratus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BGM19_34055	OEJ59135.1	BGM19_34055	BGM19_15200	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.524
BGM19_34055	OEJ60425.1	BGM19_34055	BGM19_22870	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.442
BGM19_34055	OEJ62299.1	BGM19_34055	BGM19_34060	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
BGM19_34055	fbpC	BGM19_34055	BGM19_06590	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.524
BGM19_34055	fbpC-2	BGM19_34055	BGM19_27030	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.	0.524
BGM19_34055	potA	BGM19_34055	BGM19_27115	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.	0.524
OEJ56230.1	OEJ57573.1	BGM19_39335	BGM19_05925	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.670
OEJ56230.1	OEJ59120.1	BGM19_39335	BGM19_15100	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ectoine/hydroxyectoine ABC transporter permease subunit EhuD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.679
OEJ56230.1	OEJ60784.1	BGM19_39335	BGM19_25030	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
OEJ56230.1	OEJ61227.1	BGM19_39335	BGM19_27610	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.670
OEJ57573.1	OEJ56230.1	BGM19_05925	BGM19_39335	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.670
OEJ57573.1	OEJ59119.1	BGM19_05925	BGM19_15095	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ectoine/hydroxyectoine ABC transporter permease subunit EhuC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
OEJ57573.1	OEJ59120.1	BGM19_05925	BGM19_15100	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ectoine/hydroxyectoine ABC transporter permease subunit EhuD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.806
OEJ57573.1	OEJ59930.1	BGM19_05925	BGM19_20000	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421
OEJ57573.1	OEJ60116.1	BGM19_05925	BGM19_21090	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.498
OEJ57573.1	OEJ60784.1	BGM19_05925	BGM19_25030	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
OEJ57573.1	OEJ61228.1	BGM19_05925	BGM19_27615	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
OEJ57573.1	OEJ61657.1	BGM19_05925	BGM19_30225	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
OEJ57573.1	OEJ61729.1	BGM19_05925	BGM19_30630	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
OEJ57573.1	OEJ62853.1	BGM19_05925	BGM19_05930	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978