(13 nodes) Proton-transporting V-type ATPase, V0 domain network (Streptomyces agglomeratus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OEJ62844.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)
	OEJ57793.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
	OEJ58413.1	Antibiotic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
	OEJ59187.1	MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)
	OEJ59419.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (444 aa)
	OEJ63121.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
	OEJ59520.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)
	OEJ59829.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)
	OEJ61359.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
	OEJ61499.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (439 aa)
	OEJ61705.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	OEJ63526.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
	OEJ56515.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)

Your Current Organism:

Streptomyces agglomeratus

NCBI taxonomy Id: 285458
Other names: S. agglomeratus

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OEJ57793.1	OEJ61499.1	BGM19_07235	BGM19_29290	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.732
OEJ57793.1	OEJ62844.1	BGM19_07235	BGM19_05770	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.662
OEJ58413.1	OEJ61499.1	BGM19_10865	BGM19_29290	Antibiotic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.745
OEJ58413.1	OEJ62844.1	BGM19_10865	BGM19_05770	Antibiotic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.696
OEJ59187.1	OEJ62844.1	BGM19_15530	BGM19_05770	MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
OEJ59419.1	OEJ61499.1	BGM19_16905	BGM19_29290	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.743
OEJ59419.1	OEJ62844.1	BGM19_16905	BGM19_05770	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.729
OEJ61499.1	OEJ57793.1	BGM19_29290	BGM19_07235	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
OEJ61499.1	OEJ58413.1	BGM19_29290	BGM19_10865	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Antibiotic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.745
OEJ61499.1	OEJ59419.1	BGM19_29290	BGM19_16905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.743
OEJ61499.1	OEJ62844.1	BGM19_29290	BGM19_05770	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
OEJ61499.1	OEJ63526.1	BGM19_29290	BGM19_34145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
OEJ62844.1	OEJ57793.1	BGM19_05770	BGM19_07235	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.662
OEJ62844.1	OEJ58413.1	BGM19_05770	BGM19_10865	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antibiotic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.696
OEJ62844.1	OEJ59187.1	BGM19_05770	BGM19_15530	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
OEJ62844.1	OEJ59419.1	BGM19_05770	BGM19_16905	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.729
OEJ62844.1	OEJ61499.1	BGM19_05770	BGM19_29290	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.741
OEJ62844.1	OEJ63121.1	BGM19_05770	BGM19_17205	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.533
OEJ62844.1	OEJ63526.1	BGM19_05770	BGM19_34145	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.452
OEJ63121.1	OEJ62844.1	BGM19_17205	BGM19_05770	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.533