(12 nodes) Solute-binding protein family 5 domain network (Streptomyces agglomeratus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OEJ62024.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
	OEJ62016.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (531 aa)
	OEJ60665.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)
	OEJ60941.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)
	OEJ61176.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (615 aa)
	OEJ57808.1	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
	OEJ58121.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)
	OEJ58122.1	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
	OEJ60459.1	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
	OEJ60657.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (782 aa)
	OEJ60659.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (537 aa)
	OEJ61414.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)

Your Current Organism:

Streptomyces agglomeratus

NCBI taxonomy Id: 285458
Other names: S. agglomeratus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OEJ57808.1	OEJ58121.1	BGM19_07320	BGM19_09170	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
OEJ57808.1	OEJ58122.1	BGM19_07320	BGM19_09175	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
OEJ57808.1	OEJ60459.1	BGM19_07320	BGM19_23095	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423
OEJ57808.1	OEJ60659.1	BGM19_07320	BGM19_24280	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.844
OEJ57808.1	OEJ60665.1	BGM19_07320	BGM19_24310	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.680
OEJ57808.1	OEJ60941.1	BGM19_07320	BGM19_25960	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
OEJ57808.1	OEJ61176.1	BGM19_07320	BGM19_27300	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.459
OEJ57808.1	OEJ61414.1	BGM19_07320	BGM19_28770	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.484
OEJ57808.1	OEJ62016.1	BGM19_07320	BGM19_32340	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
OEJ57808.1	OEJ62024.1	BGM19_07320	BGM19_32390	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.690
OEJ58121.1	OEJ57808.1	BGM19_09170	BGM19_07320	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
OEJ58121.1	OEJ58122.1	BGM19_09170	BGM19_09175	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.720
OEJ58121.1	OEJ60459.1	BGM19_09170	BGM19_23095	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
OEJ58121.1	OEJ60659.1	BGM19_09170	BGM19_24280	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.681
OEJ58121.1	OEJ60665.1	BGM19_09170	BGM19_24310	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.670
OEJ58121.1	OEJ60941.1	BGM19_09170	BGM19_25960	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.436
OEJ58121.1	OEJ61176.1	BGM19_09170	BGM19_27300	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
OEJ58121.1	OEJ61414.1	BGM19_09170	BGM19_28770	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476
OEJ58121.1	OEJ62016.1	BGM19_09170	BGM19_32340	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
OEJ58121.1	OEJ62024.1	BGM19_09170	BGM19_32390	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.685