(26 nodes) Luciferase-like monooxygenase network (Streptomyces agglomeratus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OEJ62729.1	5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
	OEJ57562.1	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
	OEJ57634.1	5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
	OEJ57848.1	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
	OEJ58137.1	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
	OEJ63001.1	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	OEJ58783.1	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
	OEJ59113.1	Alkanal monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
	OEJ59440.1	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
	BGM19_17065	IS110 family transposase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
	OEJ59447.1	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	OEJ59725.1	5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	OEJ59783.1	Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
	OEJ59936.1	5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
	OEJ60864.1	Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
	OEJ61032.1	Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	OEJ61364.1	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
	OEJ61593.1	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	OEJ61630.1	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
	OEJ63449.1	Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
	OEJ63453.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	OEJ61880.1	Pristinamycin IIA synthase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
	OEJ61936.1	Methylene-tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
	OEJ62215.1	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
	OEJ62217.1	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	OEJ56553.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (346 aa)

Your Current Organism:

Streptomyces agglomeratus

NCBI taxonomy Id: 285458
Other names: S. agglomeratus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BGM19_17065	OEJ59440.1	BGM19_17065	BGM19_17035	IS110 family transposase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
BGM19_17065	OEJ59447.1	BGM19_17065	BGM19_17075	IS110 family transposase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.688
BGM19_17065	OEJ61032.1	BGM19_17065	BGM19_26505	IS110 family transposase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
BGM19_17065	OEJ62215.1	BGM19_17065	BGM19_33515	IS110 family transposase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.641
OEJ56553.1	OEJ57848.1	BGM19_38550	BGM19_07585	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.624
OEJ56553.1	OEJ59447.1	BGM19_38550	BGM19_17075	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
OEJ57562.1	OEJ58783.1	BGM19_05860	BGM19_13035	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683
OEJ57562.1	OEJ59783.1	BGM19_05860	BGM19_19170	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.668
OEJ57562.1	OEJ61593.1	BGM19_05860	BGM19_29850	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.600
OEJ57848.1	OEJ56553.1	BGM19_07585	BGM19_38550	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.624
OEJ57848.1	OEJ58137.1	BGM19_07585	BGM19_09260	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.498
OEJ57848.1	OEJ58783.1	BGM19_07585	BGM19_13035	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
OEJ57848.1	OEJ61630.1	BGM19_07585	BGM19_30060	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.437
OEJ58137.1	OEJ57848.1	BGM19_09260	BGM19_07585	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.498
OEJ58137.1	OEJ59447.1	BGM19_09260	BGM19_17075	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
OEJ58137.1	OEJ59783.1	BGM19_09260	BGM19_19170	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
OEJ58137.1	OEJ63449.1	BGM19_09260	BGM19_31375	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
OEJ58783.1	OEJ57562.1	BGM19_13035	BGM19_05860	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683
OEJ58783.1	OEJ57848.1	BGM19_13035	BGM19_07585	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
OEJ58783.1	OEJ61032.1	BGM19_13035	BGM19_26505	LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457