Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BGM19_35160 | OEJ61592.1 | BGM19_35160 | BGM19_29840 | Transposase; Frameshifted; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.548 |
| BGM19_35160 | OEJ62468.1 | BGM19_35160 | BGM19_35170 | Transposase; Frameshifted; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.740 |
| BGM19_35160 | secF | BGM19_35160 | BGM19_01540 | Transposase; Frameshifted; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein translocase subunit SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.632 |
| OEJ56226.1 | ffh | BGM19_39315 | BGM19_26545 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.434 |
| OEJ56226.1 | secY | BGM19_39315 | BGM19_22350 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.481 |
| OEJ56805.1 | secF | BGM19_00825 | BGM19_01540 | Preprotein translocase subunit TatA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein translocase subunit SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.460 |
| OEJ56805.1 | tatA | BGM19_00825 | BGM19_09065 | Preprotein translocase subunit TatA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.891 |
| OEJ56805.1 | tatB | BGM19_00825 | BGM19_24445 | Preprotein translocase subunit TatA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.411 |
| OEJ56805.1 | tatC | BGM19_00825 | BGM19_09060 | Preprotein translocase subunit TatA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.989 |
| OEJ57143.1 | OEJ59039.1 | BGM19_03220 | BGM19_14580 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.620 |
| OEJ57143.1 | OEJ59965.1 | BGM19_03220 | BGM19_20215 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.841 |
| OEJ57143.1 | OEJ63182.1 | BGM19_03220 | BGM19_19630 | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.841 |
| OEJ57306.1 | OEJ59039.1 | BGM19_04265 | BGM19_14580 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.632 |
| OEJ57306.1 | OEJ59965.1 | BGM19_04265 | BGM19_20215 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.843 |
| OEJ57306.1 | OEJ63182.1 | BGM19_04265 | BGM19_19630 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.843 |
| OEJ57624.1 | OEJ59039.1 | BGM19_06260 | BGM19_14580 | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.643 |
| OEJ57624.1 | OEJ59965.1 | BGM19_06260 | BGM19_20215 | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.842 |
| OEJ57624.1 | OEJ63182.1 | BGM19_06260 | BGM19_19630 | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.843 |
| OEJ58003.1 | OEJ58415.1 | BGM19_08460 | BGM19_10875 | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.967 |
| OEJ58003.1 | OEJ59141.1 | BGM19_08460 | BGM19_15250 | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.908 |
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