STRINGSTRING
dppC dppC mppA mppA dppB_1 dppB_1 oppD_1 oppD_1 oppF_1 oppF_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dppCDipeptide transport system permease protein DppC. (348 aa)
mppAPeriplasmic murein peptide-binding protein precursor. (600 aa)
dppB_1Dipeptide transport system permease protein DppB. (325 aa)
oppD_1Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. (353 aa)
oppF_1Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily. (367 aa)
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
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