STRINGSTRING
ybdK_1 ybdK_1 ybdK_2 ybdK_2 AOT57515.1 AOT57515.1 ybdK_3 ybdK_3 sbnA_1 sbnA_1 gpx2 gpx2 haeIIIM haeIIIM pepN_1 pepN_1 pepA pepA pepN_2 pepN_2 pepN_3 pepN_3 ahcY ahcY cbs cbs metC metC patB patB metB metB ybdK_5 ybdK_5 ggt ggt mmuM mmuM ybdK_6 ybdK_6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ybdK_1Carboxylate-amine ligase YbdK; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (413 aa)
ybdK_2Carboxylate-amine ligase YbdK; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (364 aa)
AOT57515.1Hypothetical protein. (309 aa)
ybdK_3Carboxylate-amine ligase YbdK; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (363 aa)
sbnA_1Putative siderophore biosynthesis protein SbnA. (403 aa)
gpx2Hydroperoxy fatty acid reductase gpx2; Belongs to the glutathione peroxidase family. (162 aa)
haeIIIMModification methylase HaeIII. (452 aa)
pepN_1Aminopeptidase N. (833 aa)
pepACytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (506 aa)
pepN_2Aminopeptidase N. (848 aa)
pepN_3Aminopeptidase N. (854 aa)
ahcYAdenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. (485 aa)
cbsPutative cystathionine beta-synthase. (461 aa)
metCCystathionine beta-lyase. (380 aa)
patBCystathionine beta-lyase PatB. (389 aa)
metBCystathionine gamma-synthase. (384 aa)
ybdK_5Carboxylate-amine ligase YbdK; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (366 aa)
ggtGamma-glutamyltranspeptidase precursor. (620 aa)
mmuMHomocysteine S-methyltransferase. (336 aa)
ybdK_6Carboxylate-amine ligase YbdK; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (374 aa)
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
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