STRINGSTRING
lppS_1 lppS_1 pimE pimE rpfA_1 rpfA_1 AOT60781.1 AOT60781.1 AOT61145.1 AOT61145.1 AOT61146.1 AOT61146.1 lppS_3 lppS_3 lppS_4 lppS_4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lppS_1Putative L,D-transpeptidase LppS precursor. (414 aa)
pimEAlpha-1,2-mannosyltransferase; Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase. (434 aa)
rpfA_1Resuscitation-promoting factor RpfA precursor. (234 aa)
AOT60781.1Hypothetical protein. (490 aa)
AOT61145.1Putative multidrug export ATP-binding/permease protein. (658 aa)
AOT61146.1Putative multidrug export ATP-binding/permease protein. (611 aa)
lppS_3Putative L,D-transpeptidase LppS precursor. (464 aa)
lppS_4Putative L,D-transpeptidase LppS precursor. (420 aa)
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
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