Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOT57957.1 | baeB_2 | A4G23_00753 | A4G23_03015 | Putative metallo-hydrolase. | Putative polyketide biosynthesis zinc-dependent hydrolase BaeB. | 0.424 |
| AOT58801.1 | cphA | A4G23_01620 | A4G23_00927 | Metallo-beta-lactamase superfamily protein. | Beta-lactamase precursor. | 0.580 |
| AOT60148.1 | baeB_2 | A4G23_03014 | A4G23_03015 | NUDIX domain protein. | Putative polyketide biosynthesis zinc-dependent hydrolase BaeB. | 0.992 |
| AOT60380.1 | mqnE_3 | A4G23_03251 | A4G23_03246 | Putative oxidoreductase. | Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.529 |
| AOT60380.1 | ubiE_2 | A4G23_03251 | A4G23_03248 | Putative oxidoreductase. | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). | 0.577 |
| add2_2 | mqnB | A4G23_04186 | A4G23_02416 | Aminodeoxyfutalosine deaminase. | Futalosine hydrolase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.909 |
| add2_2 | mqnE_2 | A4G23_04186 | A4G23_03229 | Aminodeoxyfutalosine deaminase. | Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.908 |
| baeB_2 | AOT57957.1 | A4G23_03015 | A4G23_00753 | Putative polyketide biosynthesis zinc-dependent hydrolase BaeB. | Putative metallo-hydrolase. | 0.424 |
| baeB_2 | AOT60148.1 | A4G23_03015 | A4G23_03014 | Putative polyketide biosynthesis zinc-dependent hydrolase BaeB. | NUDIX domain protein. | 0.992 |
| cphA | AOT58801.1 | A4G23_00927 | A4G23_01620 | Beta-lactamase precursor. | Metallo-beta-lactamase superfamily protein. | 0.580 |
| dapC | kynA | A4G23_02942 | A4G23_02955 | Putative N-succinyldiaminopimelate aminotransferase DapC. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.533 |
| dapC | kynU | A4G23_02942 | A4G23_02956 | Putative N-succinyldiaminopimelate aminotransferase DapC. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.551 |
| kynA | dapC | A4G23_02955 | A4G23_02942 | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | Putative N-succinyldiaminopimelate aminotransferase DapC. | 0.533 |
| kynA | kynU | A4G23_02955 | A4G23_02956 | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.999 |
| kynU | dapC | A4G23_02956 | A4G23_02942 | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | Putative N-succinyldiaminopimelate aminotransferase DapC. | 0.551 |
| kynU | kynA | A4G23_02956 | A4G23_02955 | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.999 |
| mqnA | mqnB | A4G23_03243 | A4G23_02416 | Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | Futalosine hydrolase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.944 |
| mqnA | mqnD | A4G23_03243 | A4G23_02417 | Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 1,4-dihydroxy-6-naphtoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily. | 0.950 |
| mqnA | mqnE_2 | A4G23_03243 | A4G23_03229 | Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.989 |
| mqnA | mqnE_3 | A4G23_03243 | A4G23_03246 | Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.973 |
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