STRINGSTRING
recQ_1 recQ_1 AOT58061.1 AOT58061.1 AOT57216.1 AOT57216.1 AOT57759.1 AOT57759.1 AOT57705.1 AOT57705.1 uvrB uvrB AOT58374.1 AOT58374.1 hrpB_1 hrpB_1 secA secA mfd mfd AOT59558.1 AOT59558.1 rhlE_1 rhlE_1 hrpB_2 hrpB_2 rhlE_2 rhlE_2 srmB srmB cshA cshA recG recG AOT61390.1 AOT61390.1 recQ_2 recQ_2 rhlE_3 rhlE_3 recQ_3 recQ_3 rhlE_4 rhlE_4 AOT62537.1 AOT62537.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
recQ_1ATP-dependent DNA helicase RecQ. (567 aa)
AOT58061.1Ski2-like helicase. (942 aa)
AOT57216.1Helicase associated domain protein. (847 aa)
AOT57759.1Hypothetical protein; SNF2 family N-terminal domain. (608 aa)
AOT57705.1Ski2-like helicase. (837 aa)
uvrBUvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (722 aa)
AOT58374.1ATP-dependent helicase HepA. (989 aa)
hrpB_1ATP-dependent RNA helicase HrpB. (897 aa)
secAPreprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (936 aa)
mfdTranscription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1176 aa)
AOT59558.1Hypothetical protein; Helicase conserved C-terminal domain. (547 aa)
rhlE_1ATP-dependent RNA helicase RhlE. (749 aa)
hrpB_2ATP-dependent RNA helicase HrpB. (1319 aa)
rhlE_2ATP-dependent RNA helicase RhlE. (497 aa)
srmBATP-dependent RNA helicase SrmB. (830 aa)
cshADEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family. (676 aa)
recGATP-dependent DNA helicase RecG. (762 aa)
AOT61390.1Putative ATP-dependent helicase Lhr. (1544 aa)
recQ_2ATP-dependent DNA helicase RecQ. (720 aa)
rhlE_3ATP-dependent RNA helicase RhlE. (499 aa)
recQ_3ATP-dependent DNA helicase RecQ. (613 aa)
rhlE_4ATP-dependent RNA helicase RhlE. (475 aa)
AOT62537.1ATP-dependent helicase HepA. (977 aa)
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
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