STRINGSTRING
ydcR ydcR gcvP gcvP lysN lysN argD_1 argD_1 cobD cobD pucG pucG ectB ectB csd_1 csd_1 alaA_1 alaA_1 hisC hisC csd_2 csd_2 iscS_1 iscS_1 AOT58735.1 AOT58735.1 metZ metZ fdtB_2 fdtB_2 ddc_1 ddc_1 bioK_1 bioK_1 fdtB_3 fdtB_3 serC serC metC metC pat pat dapC dapC patB patB kynU kynU davT davT yjiR yjiR dapL dapL alaA_2 alaA_2 metB metB glyA_1 glyA_1 rocD_1 rocD_1 AOT60438.1 AOT60438.1 hemL2 hemL2 ltaE_2 ltaE_2 bioA bioA bioF1 bioF1 fdtB_1 fdtB_1 arnB arnB ltaE_1 ltaE_1 neoB neoB neoN neoN argD_3 argD_3 glyA_2 glyA_2 kbl kbl tyrB tyrB argD_2 argD_2 dat dat ddc_2 ddc_2 csd_3 csd_3 rocD_2 rocD_2 bioF bioF vioD_2 vioD_2 gabT gabT bioK_3 bioK_3 bioK_2 bioK_2 iscS_2 iscS_2 glyA2 glyA2
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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ydcRPutative HTH-type transcriptional regulator YdcR. (449 aa)
gcvPGlycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (961 aa)
lysN2-aminoadipate transaminase. (501 aa)
argD_1Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (400 aa)
cobDThreonine-phosphate decarboxylase. (367 aa)
pucGPurine catabolism protein PucG. (369 aa)
ectBDiaminobutyrate--2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (450 aa)
csd_1Putative cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (418 aa)
alaA_1Glutamate-pyruvate aminotransferase AlaA. (403 aa)
hisCHistidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (370 aa)
csd_2Putative cysteine desulfurase. (534 aa)
iscS_1Cysteine desulfurase; Belongs to the sulfur carrier protein TusA family. (462 aa)
AOT58735.1Putative aminotransferase. (482 aa)
metZO-succinylhomoserine sulfhydrylase. (401 aa)
fdtB_2dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (372 aa)
ddc_1L-2,4-diaminobutyrate decarboxylase. (480 aa)
bioK_1L-Lysine-8-amino-7-oxononanoate aminotransferase. (904 aa)
fdtB_3dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (374 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (372 aa)
metCCystathionine beta-lyase. (380 aa)
patPutative phenylalanine aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. (361 aa)
dapCPutative N-succinyldiaminopimelate aminotransferase DapC. (390 aa)
patBCystathionine beta-lyase PatB. (389 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (474 aa)
davT5-aminovalerate aminotransferase DavT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (502 aa)
yjiRPutative HTH-type transcriptional regulator YjiR. (447 aa)
dapLLL-diaminopimelate aminotransferase. (380 aa)
alaA_2Glutamate-pyruvate aminotransferase AlaA. (403 aa)
metBCystathionine gamma-synthase. (384 aa)
glyA_1Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (441 aa)
rocD_1Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (415 aa)
AOT60438.1Aspartate aminotransferase. (408 aa)
hemL2Glutamate-1-semialdehyde 2,1-aminomutase 2. (435 aa)
ltaE_2Low specificity L-threonine aldolase. (509 aa)
bioAAdenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. (431 aa)
bioF18-amino-7-oxononanoate synthase 1. (390 aa)
fdtB_1dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (369 aa)
arnBUDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (378 aa)
ltaE_1Low specificity L-threonine aldolase. (359 aa)
neoBL-glutamine:2-deoxy-scyllo-inosose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (424 aa)
neoNNeamine transaminase NeoN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (416 aa)
argD_3Acetylornithine/acetyl-lysine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (461 aa)
glyA_2Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (453 aa)
kbl2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (397 aa)
tyrBAromatic-amino-acid aminotransferase. (391 aa)
argD_2Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (436 aa)
datDiaminobutyrate--2-oxoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (446 aa)
ddc_2L-2,4-diaminobutyrate decarboxylase. (536 aa)
csd_3Putative cysteine desulfurase. (414 aa)
rocD_2Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (416 aa)
bioF8-amino-7-oxononanoate synthase. (1399 aa)
vioD_2Capreomycidine synthase. (389 aa)
gabT4-aminobutyrate aminotransferase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (449 aa)
bioK_3L-Lysine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (445 aa)
bioK_2L-Lysine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (462 aa)
iscS_2Cysteine desulfurase. (387 aa)
glyA2Serine hydroxymethyltransferase 2; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (419 aa)
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
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