STRINGSTRING
lysA_2 lysA_2 btrK btrK AOT58045.1 AOT58045.1 AOT58459.1 AOT58459.1 lysA_1 lysA_1 AOT59904.1 AOT59904.1 alr alr AOT60783.1 AOT60783.1 lysA_3 lysA_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lysA_2Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (463 aa)
btrKL-glutamyl-[BtrI acyl-carrier protein] decarboxylase. (422 aa)
AOT58045.1D-threonine aldolase. (400 aa)
AOT58459.1Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (242 aa)
lysA_1Diaminopimelate decarboxylase. (443 aa)
AOT59904.1Alanine racemase. (343 aa)
alrAlanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (394 aa)
AOT60783.1D-threonine aldolase. (491 aa)
lysA_3Diaminopimelate decarboxylase. (517 aa)
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
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