(12 nodes) Condensation domain network (Streptomyces rubrolavendulae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	srfAA_2	Surfactin synthase subunit 1. (496 aa)
	AOT61968.1	Acyltransferase PapA5. (462 aa)
	dhbF_2	Dimodular nonribosomal peptide synthase. (1937 aa)
	lgrB_1	Linear gramicidin synthase subunit B. (462 aa)
	lgrB_2	Linear gramicidin synthase subunit B. (553 aa)
	srfAA_1	Surfactin synthase subunit 1; Belongs to the ATP-dependent AMP-binding enzyme family. (1089 aa)
	tycC_2	Tyrocidine synthase 3. (1073 aa)
	tycC_3	Tyrocidine synthase 3. (2125 aa)
	lgrD_2	Linear gramicidin synthase subunit D. (4618 aa)
	lgrD_3	Linear gramicidin synthase subunit D. (2614 aa)
	dhbF_1	Dimodular nonribosomal peptide synthase. (2443 aa)
	tycC_5	Tyrocidine synthase 3. (2564 aa)

Your Current Organism:

Streptomyces rubrolavendulae

NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOT61968.1	dhbF_1	A4G23_04860	A4G23_04866	Acyltransferase PapA5.	Dimodular nonribosomal peptide synthase.	0.645
AOT61968.1	tycC_3	A4G23_04860	A4G23_04390	Acyltransferase PapA5.	Tyrocidine synthase 3.	0.637
dhbF_1	AOT61968.1	A4G23_04866	A4G23_04860	Dimodular nonribosomal peptide synthase.	Acyltransferase PapA5.	0.645
dhbF_1	dhbF_2	A4G23_04866	A4G23_05512	Dimodular nonribosomal peptide synthase.	Dimodular nonribosomal peptide synthase.	0.995
dhbF_1	lgrB_1	A4G23_04866	A4G23_04378	Dimodular nonribosomal peptide synthase.	Linear gramicidin synthase subunit B.	0.632
dhbF_1	lgrB_2	A4G23_04866	A4G23_04382	Dimodular nonribosomal peptide synthase.	Linear gramicidin synthase subunit B.	0.994
dhbF_1	lgrD_2	A4G23_04866	A4G23_04410	Dimodular nonribosomal peptide synthase.	Linear gramicidin synthase subunit D.	0.996
dhbF_1	lgrD_3	A4G23_04866	A4G23_04411	Dimodular nonribosomal peptide synthase.	Linear gramicidin synthase subunit D.	0.649
dhbF_1	srfAA_1	A4G23_04866	A4G23_04384	Dimodular nonribosomal peptide synthase.	Surfactin synthase subunit 1; Belongs to the ATP-dependent AMP-binding enzyme family.	0.996
dhbF_1	srfAA_2	A4G23_04866	A4G23_05507	Dimodular nonribosomal peptide synthase.	Surfactin synthase subunit 1.	0.982
dhbF_1	tycC_2	A4G23_04866	A4G23_04385	Dimodular nonribosomal peptide synthase.	Tyrocidine synthase 3.	0.982
dhbF_1	tycC_3	A4G23_04866	A4G23_04390	Dimodular nonribosomal peptide synthase.	Tyrocidine synthase 3.	0.999
dhbF_1	tycC_5	A4G23_04866	A4G23_05326	Dimodular nonribosomal peptide synthase.	Tyrocidine synthase 3.	0.953
dhbF_2	dhbF_1	A4G23_05512	A4G23_04866	Dimodular nonribosomal peptide synthase.	Dimodular nonribosomal peptide synthase.	0.995
dhbF_2	lgrB_1	A4G23_05512	A4G23_04378	Dimodular nonribosomal peptide synthase.	Linear gramicidin synthase subunit B.	0.620
dhbF_2	lgrB_2	A4G23_05512	A4G23_04382	Dimodular nonribosomal peptide synthase.	Linear gramicidin synthase subunit B.	0.985
dhbF_2	lgrD_2	A4G23_05512	A4G23_04410	Dimodular nonribosomal peptide synthase.	Linear gramicidin synthase subunit D.	0.991
dhbF_2	lgrD_3	A4G23_05512	A4G23_04411	Dimodular nonribosomal peptide synthase.	Linear gramicidin synthase subunit D.	0.621
dhbF_2	srfAA_1	A4G23_05512	A4G23_04384	Dimodular nonribosomal peptide synthase.	Surfactin synthase subunit 1; Belongs to the ATP-dependent AMP-binding enzyme family.	0.988
dhbF_2	srfAA_2	A4G23_05512	A4G23_05507	Dimodular nonribosomal peptide synthase.	Surfactin synthase subunit 1.	0.995