STRINGSTRING
rfbB rfbB AOT57244.1 AOT57244.1 strE_1 strE_1 qorB_1 qorB_1 galE_2 galE_2 gmd gmd fcl fcl galE_3 galE_3 wbiB wbiB strE_2 strE_2 tal_2 tal_2 lgrD_4 lgrD_4 bdhA bdhA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rfbBdTDP-glucose 4,6-dehydratase. (328 aa)
AOT57244.13 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase. (303 aa)
strE_1dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (339 aa)
qorB_1Quinone oxidoreductase 2. (251 aa)
galE_2UDP-glucose 4-epimerase. (323 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (337 aa)
fclGDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (340 aa)
galE_3UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (349 aa)
wbiBdTDP-L-rhamnose 4-epimerase. (384 aa)
strE_2dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (326 aa)
tal_2dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD(P)(+)). (320 aa)
lgrD_4Linear gramicidin synthase subunit D. (315 aa)
bdhAD-beta-hydroxybutyrate dehydrogenase. (263 aa)
Your Current Organism:
Streptomyces rubrolavendulae
NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae
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