(7 nodes) RibD C-terminal domain network (Streptomyces rubrolavendulae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOT58968.1	Hypothetical protein; RibD C-terminal domain. (215 aa)
	ribD	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (368 aa)
	AOT57598.1	Hypothetical protein; RibD C-terminal domain. (250 aa)
	AOT60987.1	Hypothetical protein; RibD C-terminal domain. (195 aa)
	ribD2	2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase. (318 aa)
	AOT61950.1	Hypothetical protein; RibD C-terminal domain. (206 aa)
	AOT62571.1	5-amino-6-(5-phosphoribosylamino)uracil reductase. (198 aa)

Your Current Organism:

Streptomyces rubrolavendulae

NCBI taxonomy Id: 285473
Other names: S. rubrolavendulae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOT57598.1	AOT61950.1	A4G23_00387	A4G23_04842	Hypothetical protein; RibD C-terminal domain.	Hypothetical protein; RibD C-terminal domain.	0.593
AOT57598.1	AOT62571.1	A4G23_00387	A4G23_05470	Hypothetical protein; RibD C-terminal domain.	5-amino-6-(5-phosphoribosylamino)uracil reductase.	0.648
AOT58968.1	AOT61950.1	A4G23_01793	A4G23_04842	Hypothetical protein; RibD C-terminal domain.	Hypothetical protein; RibD C-terminal domain.	0.443
AOT58968.1	AOT62571.1	A4G23_01793	A4G23_05470	Hypothetical protein; RibD C-terminal domain.	5-amino-6-(5-phosphoribosylamino)uracil reductase.	0.522
AOT61950.1	AOT57598.1	A4G23_04842	A4G23_00387	Hypothetical protein; RibD C-terminal domain.	Hypothetical protein; RibD C-terminal domain.	0.593
AOT61950.1	AOT58968.1	A4G23_04842	A4G23_01793	Hypothetical protein; RibD C-terminal domain.	Hypothetical protein; RibD C-terminal domain.	0.443
AOT62571.1	AOT57598.1	A4G23_05470	A4G23_00387	5-amino-6-(5-phosphoribosylamino)uracil reductase.	Hypothetical protein; RibD C-terminal domain.	0.648
AOT62571.1	AOT58968.1	A4G23_05470	A4G23_01793	5-amino-6-(5-phosphoribosylamino)uracil reductase.	Hypothetical protein; RibD C-terminal domain.	0.522