STRINGSTRING
SMF16315.1 SMF16315.1 vapC vapC SMF39442.1 SMF39442.1 SMF39460.1 SMF39460.1 SMF64302.1 SMF64302.1 SMF64311.1 SMF64311.1 SMF66370.1 SMF66370.1 SMF66378.1 SMF66378.1 vapC-2 vapC-2 SMF83016.1 SMF83016.1 SMF83022.1 SMF83022.1 vapC-3 vapC-3 SMF84096.1 SMF84096.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMF16315.1Antitoxin VapB. (74 aa)
vapCtRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (138 aa)
SMF39442.1RelE toxin of RelE / RelB toxin-antitoxin system. (132 aa)
SMF39460.1Transcriptional regulator, XRE family. (99 aa)
SMF64302.1BrnA antitoxin of type II toxin-antitoxin system. (102 aa)
SMF64311.1Hypothetical protein. (131 aa)
SMF66370.1Hypothetical protein. (91 aa)
SMF66378.1Putative transcriptional regulator. (85 aa)
vapC-2Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (138 aa)
SMF83016.1mRNA interferase HigB. (98 aa)
SMF83022.1HTH-type transcriptional regulator / antitoxin HigA. (131 aa)
vapC-3Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (138 aa)
SMF84096.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (84 aa)
Your Current Organism:
Azospirillum oryzae
NCBI taxonomy Id: 286727
Other names: A. oryzae, Azospirillum oryzae Xie and Yokota 2005, CCTCC AB204051, IAM 15130, JCM 21588, NBRC 102291, strain COC8
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