STRINGSTRING
spc25 spc25 ndc80 ndc80 ENSCVAP00000005600 ENSCVAP00000005600 melk melk nusap1 nusap1 cep55 cep55 ttk ttk LOC107101428 LOC107101428 kif4a kif4a pbk pbk
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
spc25SPC25 component of NDC80 kinetochore complex. (237 aa)
ndc80NDC80 kinetochore complex component. (631 aa)
ENSCVAP00000005600BUB1 N-terminal domain-containing protein. (100 aa)
melkNon-specific serine/threonine protein kinase. (680 aa)
nusap1Nucleolar and spindle associated protein 1. (449 aa)
cep55Centrosomal protein 55 like. (533 aa)
ttkTtk protein kinase. (1003 aa)
LOC107101428UF2 component of NDC80 kinetochore complex. (484 aa)
kif4aKinesin family member 4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1243 aa)
pbkPDZ binding kinase. (352 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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