STRINGSTRING
LOC107094393 LOC107094393 vcp vcp ubxn1 ubxn1 ubxn2a ubxn2a UBXN4 UBXN4 ubxn6 ubxn6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107094393Zgc:136908; Belongs to the AAA ATPase family. (808 aa)
vcpValosin containing protein; Belongs to the AAA ATPase family. (806 aa)
ubxn1UBX domain protein 1. (309 aa)
ubxn2aUBX domain protein 2A. (246 aa)
UBXN4UBX domain protein 4. (526 aa)
ubxn6UBX domain protein 6. (434 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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