STRINGSTRING
ern1 ern1 LOC107086406 LOC107086406 xbp1 xbp1 atf6 atf6 atf6b atf6b LOC107085724 LOC107085724
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ern1Endoplasmic reticulum to nucleus signaling 1. (1063 aa)
LOC107086406Endoplasmic reticulum to nucleus signaling 2. (973 aa)
xbp1X-box binding protein 1. (261 aa)
atf6Activating transcription factor 6. (647 aa)
atf6bBZIP domain-containing protein. (717 aa)
LOC107085724Wolfram syndrome 1a (wolframin). (1038 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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