(6 nodes) CREB3 factors activate genes, and pKID domain network (Cyprinodon variegatus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107098380	cAMP responsive element binding protein 3-like 3a. (434 aa)
	LOC107093853	cAMP responsive element binding protein 3-like 3 like. (497 aa)
	CREB3L4	cAMP responsive element binding protein 3 like 4. (406 aa)
	creb1	cAMP responsive element binding protein 1a. (331 aa)
	LOC107088346	Uncharacterized protein. (315 aa)
	crebrf	Creb3 regulatory factor. (713 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CREB3L4	LOC107088346	ENSCVAP00000010144	ENSCVAP00000023323	cAMP responsive element binding protein 3 like 4.	Uncharacterized protein.	0.934
CREB3L4	crebrf	ENSCVAP00000010144	ENSCVAP00000027507	cAMP responsive element binding protein 3 like 4.	Creb3 regulatory factor.	0.445
LOC107088346	CREB3L4	ENSCVAP00000023323	ENSCVAP00000010144	Uncharacterized protein.	cAMP responsive element binding protein 3 like 4.	0.934
LOC107088346	LOC107093853	ENSCVAP00000023323	ENSCVAP00000009103	Uncharacterized protein.	cAMP responsive element binding protein 3-like 3 like.	0.934
LOC107088346	LOC107098380	ENSCVAP00000023323	ENSCVAP00000004124	Uncharacterized protein.	cAMP responsive element binding protein 3-like 3a.	0.934
LOC107088346	creb1	ENSCVAP00000023323	ENSCVAP00000015382	Uncharacterized protein.	cAMP responsive element binding protein 1a.	0.901
LOC107093853	LOC107088346	ENSCVAP00000009103	ENSCVAP00000023323	cAMP responsive element binding protein 3-like 3 like.	Uncharacterized protein.	0.934
LOC107093853	crebrf	ENSCVAP00000009103	ENSCVAP00000027507	cAMP responsive element binding protein 3-like 3 like.	Creb3 regulatory factor.	0.813
LOC107098380	LOC107088346	ENSCVAP00000004124	ENSCVAP00000023323	cAMP responsive element binding protein 3-like 3a.	Uncharacterized protein.	0.934
LOC107098380	crebrf	ENSCVAP00000004124	ENSCVAP00000027507	cAMP responsive element binding protein 3-like 3a.	Creb3 regulatory factor.	0.732
creb1	LOC107088346	ENSCVAP00000015382	ENSCVAP00000023323	cAMP responsive element binding protein 1a.	Uncharacterized protein.	0.901
crebrf	CREB3L4	ENSCVAP00000027507	ENSCVAP00000010144	Creb3 regulatory factor.	cAMP responsive element binding protein 3 like 4.	0.445
crebrf	LOC107093853	ENSCVAP00000027507	ENSCVAP00000009103	Creb3 regulatory factor.	cAMP responsive element binding protein 3-like 3 like.	0.813
crebrf	LOC107098380	ENSCVAP00000027507	ENSCVAP00000004124	Creb3 regulatory factor.	cAMP responsive element binding protein 3-like 3a.	0.732