STRINGSTRING
LOC107105061 LOC107105061 LOC107103885 LOC107103885 LOC107087152 LOC107087152 pdgfc pdgfc vegfb vegfb pir pir pdgfrb pdgfrb pdgfd pdgfd flt1 flt1 pgf pgf flt4 flt4 pdgfa pdgfa LOC107090045 LOC107090045 LOC107090056 LOC107090056 vegfa vegfa vegfd vegfd kdr kdr ENSCVAP00000028612 ENSCVAP00000028612 LOC107092557 LOC107092557 pdgfrl pdgfrl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107105061Uncharacterized protein. (498 aa)
LOC107103885Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (360 aa)
LOC107087152Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (492 aa)
pdgfcPlatelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family. (361 aa)
vegfbPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (300 aa)
pirPirin; Belongs to the pirin family. (290 aa)
pdgfrbPlatelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1102 aa)
pdgfdPlatelet derived growth factor d; Belongs to the PDGF/VEGF growth factor family. (362 aa)
flt1Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1182 aa)
pgfPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (136 aa)
flt4Fms-related tyrosine kinase 4; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1390 aa)
pdgfaPlatelet-derived growth factor alpha polypeptide b; Belongs to the PDGF/VEGF growth factor family. (220 aa)
LOC107090045Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (550 aa)
LOC107090056Platelet-derived growth factor alpha polypeptide a; Belongs to the PDGF/VEGF growth factor family. (199 aa)
vegfaVascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (214 aa)
vegfdVascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family. (266 aa)
kdrKinase insert domain receptor (a type III receptor tyrosine kinase); Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1336 aa)
ENSCVAP00000028612PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (150 aa)
LOC107092557Kinase insert domain receptor like; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1302 aa)
pdgfrlPlatelet-derived growth factor receptor-like. (366 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.