STRINGSTRING
atg12 atg12 atg16l1 atg16l1 atg5 atg5 atg3 atg3 gabarapl2 gabarapl2 atg7 atg7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
atg16l1ATG16 autophagy related 16-like 1 (S. cerevisiae). (604 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
atg3Autophagy-related protein 3. (316 aa)
gabarapl2GABA(A) receptor-associated protein like 2. (116 aa)
atg7ATG7 autophagy related 7 homolog (S. cerevisiae). (668 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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