(17 nodes) TRIAD supradomain, and Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs) network (Cyprinodon variegatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCVAP00000002488	Uncharacterized protein. (126 aa)
	rnf216	Ring finger protein 216. (820 aa)
	LOC107088370	RBR-type E3 ubiquitin transferase. (840 aa)
	LOC107101467	RBR-type E3 ubiquitin transferase. (289 aa)
	LOC107101458	Uncharacterized protein. (271 aa)
	cuedc1	CUE domain containing 1b. (373 aa)
	ENSCVAP00000007851	Uncharacterized protein. (252 aa)
	LOC107096594	RBR-type E3 ubiquitin transferase. (504 aa)
	LOC107102939	RBR-type E3 ubiquitin transferase. (487 aa)
	rnf144a	RBR-type E3 ubiquitin transferase. (280 aa)
	rnf19b	RBR-type E3 ubiquitin transferase. (711 aa)
	LOC107092475	RBR-type E3 ubiquitin transferase. (1277 aa)
	LOC107082730	RBR-type E3 ubiquitin transferase. (647 aa)
	arih2	RBR-type E3 ubiquitin transferase. (432 aa)
	LOC107101466	Uncharacterized protein. (300 aa)
	LOC107095602	Uncharacterized protein. (273 aa)
	LOC107104436	RBR-type E3 ubiquitin transferase. (260 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000002488	arih2	ENSCVAP00000002488	ENSCVAP00000021504	Uncharacterized protein.	RBR-type E3 ubiquitin transferase.	0.475
LOC107082730	rnf216	ENSCVAP00000019846	ENSCVAP00000002570	RBR-type E3 ubiquitin transferase.	Ring finger protein 216.	0.476
LOC107088370	rnf216	ENSCVAP00000003985	ENSCVAP00000002570	RBR-type E3 ubiquitin transferase.	Ring finger protein 216.	0.476
LOC107092475	rnf216	ENSCVAP00000017677	ENSCVAP00000002570	RBR-type E3 ubiquitin transferase.	Ring finger protein 216.	0.529
arih2	ENSCVAP00000002488	ENSCVAP00000021504	ENSCVAP00000002488	RBR-type E3 ubiquitin transferase.	Uncharacterized protein.	0.475
rnf144a	rnf216	ENSCVAP00000012956	ENSCVAP00000002570	RBR-type E3 ubiquitin transferase.	Ring finger protein 216.	0.564
rnf19b	rnf216	ENSCVAP00000016845	ENSCVAP00000002570	RBR-type E3 ubiquitin transferase.	Ring finger protein 216.	0.582
rnf216	LOC107082730	ENSCVAP00000002570	ENSCVAP00000019846	Ring finger protein 216.	RBR-type E3 ubiquitin transferase.	0.476
rnf216	LOC107088370	ENSCVAP00000002570	ENSCVAP00000003985	Ring finger protein 216.	RBR-type E3 ubiquitin transferase.	0.476
rnf216	LOC107092475	ENSCVAP00000002570	ENSCVAP00000017677	Ring finger protein 216.	RBR-type E3 ubiquitin transferase.	0.529
rnf216	rnf144a	ENSCVAP00000002570	ENSCVAP00000012956	Ring finger protein 216.	RBR-type E3 ubiquitin transferase.	0.564
rnf216	rnf19b	ENSCVAP00000002570	ENSCVAP00000016845	Ring finger protein 216.	RBR-type E3 ubiquitin transferase.	0.582