STRINGSTRING
rnf216 rnf216 LOC107102939 LOC107102939 rnf144a rnf144a rnf19b rnf19b LOC107082730 LOC107082730
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rnf216Ring finger protein 216. (820 aa)
LOC107102939RBR-type E3 ubiquitin transferase. (487 aa)
rnf144aRBR-type E3 ubiquitin transferase. (280 aa)
rnf19bRBR-type E3 ubiquitin transferase. (711 aa)
LOC107082730RBR-type E3 ubiquitin transferase. (647 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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