53 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107093338	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (323 aa)
	LOC107095812	Zgc:77938. (388 aa)
	LOC107087194	Myocardin related transcription factor Aa. (1103 aa)
	LOC107094211	Zgc:112332; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (297 aa)
	LOC107094203	Si:dkey-73n8.3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (298 aa)
	cenpv	Centromere protein V. (127 aa)
	LOC107085611	Retinol dehydrogenase 10-like. (165 aa)
	LOC107098429	Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 1. (316 aa)
	rbp2	Retinol binding protein 2a, cellular; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)
	rpe65	Retinoid isomerohydrolase RPE65 a. (533 aa)
	aldh1a3	Aldehyde dehydrogenase 1 family, member A3; Belongs to the aldehyde dehydrogenase family. (511 aa)
	LOC107087314	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (319 aa)
	LOC107097786	Retinaldehyde binding protein 1a. (312 aa)
	esd	S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (334 aa)
	rdh10	Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (340 aa)
	ENSCVAP00000008305	Amine oxidase; Belongs to the copper/topaquinone oxidase family. (150 aa)
	LOC107102378	Si:ch1073-13h15.3. (613 aa)
	LOC107091536	Zgc:109982; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (317 aa)
	LOC107094918	LRAT domain-containing protein. (213 aa)
	ENSCVAP00000010792	Uncharacterized protein. (142 aa)
	LOC107084832	Uncharacterized protein. (611 aa)
	LOC107082507	Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (540 aa)
	dhrs3	Dehydrogenase/reductase (SDR family) member 3b; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (302 aa)
	LOC107102836	Uncharacterized protein. (325 aa)
	LOC107085779	PKS_ER domain-containing protein. (378 aa)
	rdh5	Retinol dehydrogenase 5 (11-cis/9-cis); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (347 aa)
	vat1l	Vesicle amine transport 1-like. (413 aa)
	LOC107097534	Beta-carotene oxygenase 1, like. (451 aa)
	LOC107082284	Lecithin retinol acyltransferase b, tandem duplicate 1. (233 aa)
	LOC107082299	Lecithin retinol acyltransferase b, tandem duplicate 2. (225 aa)
	VAT1	Vesicle amine transport 1. (430 aa)
	sdr16c5	Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (306 aa)
	rdh12	Retinol dehydrogenase 12. (363 aa)
	dhrs12	Dehydrogenase/reductase (SDR family) member 12. (288 aa)
	LOC107095263	Si:dkey-23o4.6; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (353 aa)
	aox1	Aldehyde oxidase 6. (1332 aa)
	ENSCVAP00000020604	Uncharacterized protein. (316 aa)
	LOC107095807	S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (376 aa)
	LOC107082002	Dehydrogenase/reductase (SDR family) member 9; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (320 aa)
	ENSCVAP00000021488	PKS_ER domain-containing protein. (237 aa)
	LOC107093921	Beta-carotene oxygenase 1. (520 aa)
	LOC107087635	Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family. (517 aa)
	LOC107102491	Dehydrogenase/reductase (SDR family) member 4. (278 aa)
	hacl1	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family. (581 aa)
	LOC107083039	Retinol dehydrogenase 8a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)
	LOC107100583	Si:ch211-107o10.3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (331 aa)
	LOC107102879	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (300 aa)
	LOC107085778	Uncharacterized protein. (348 aa)
	LOC107085782	Uncharacterized protein. (378 aa)
	LOC107087978	Zgc:64106. (321 aa)
	LOC107102239	Amine oxidase; Belongs to the copper/topaquinone oxidase family. (224 aa)
	LOC107104087	Retinol dehydrogenase 12, like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (303 aa)
	adhfe1	Alcohol dehydrogenase iron containing 1. (419 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000008305	LOC107087194	ENSCVAP00000008305	ENSCVAP00000002130	Amine oxidase; Belongs to the copper/topaquinone oxidase family.	Myocardin related transcription factor Aa.	0.648
ENSCVAP00000008305	adhfe1	ENSCVAP00000008305	ENSCVAP00000030816	Amine oxidase; Belongs to the copper/topaquinone oxidase family.	Alcohol dehydrogenase iron containing 1.	0.635
ENSCVAP00000010792	LOC107082002	ENSCVAP00000010792	ENSCVAP00000020732	Uncharacterized protein.	Dehydrogenase/reductase (SDR family) member 9; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.661
ENSCVAP00000010792	LOC107082284	ENSCVAP00000010792	ENSCVAP00000017837	Uncharacterized protein.	Lecithin retinol acyltransferase b, tandem duplicate 1.	0.927
ENSCVAP00000010792	LOC107082299	ENSCVAP00000010792	ENSCVAP00000017840	Uncharacterized protein.	Lecithin retinol acyltransferase b, tandem duplicate 2.	0.906
ENSCVAP00000010792	LOC107082507	ENSCVAP00000010792	ENSCVAP00000012750	Uncharacterized protein.	Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.	0.916
ENSCVAP00000010792	LOC107083039	ENSCVAP00000010792	ENSCVAP00000026972	Uncharacterized protein.	Retinol dehydrogenase 8a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.689
ENSCVAP00000010792	LOC107084832	ENSCVAP00000010792	ENSCVAP00000010804	Uncharacterized protein.	Uncharacterized protein.	0.901
ENSCVAP00000010792	LOC107085778	ENSCVAP00000010792	ENSCVAP00000029545	Uncharacterized protein.	Uncharacterized protein.	0.905
ENSCVAP00000010792	LOC107085779	ENSCVAP00000010792	ENSCVAP00000014687	Uncharacterized protein.	PKS_ER domain-containing protein.	0.905
ENSCVAP00000010792	LOC107085782	ENSCVAP00000010792	ENSCVAP00000029570	Uncharacterized protein.	Uncharacterized protein.	0.905
ENSCVAP00000010792	LOC107087314	ENSCVAP00000010792	ENSCVAP00000007306	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.661
ENSCVAP00000010792	LOC107087635	ENSCVAP00000010792	ENSCVAP00000024423	Uncharacterized protein.	Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.	0.910
ENSCVAP00000010792	LOC107091536	ENSCVAP00000010792	ENSCVAP00000010151	Uncharacterized protein.	Zgc:109982; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.689
ENSCVAP00000010792	LOC107093338	ENSCVAP00000010792	ENSCVAP00000000135	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.689
ENSCVAP00000010792	LOC107094203	ENSCVAP00000010792	ENSCVAP00000002391	Uncharacterized protein.	Si:dkey-73n8.3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.698
ENSCVAP00000010792	LOC107094918	ENSCVAP00000010792	ENSCVAP00000010680	Uncharacterized protein.	LRAT domain-containing protein.	0.906
ENSCVAP00000010792	LOC107095263	ENSCVAP00000010792	ENSCVAP00000018556	Uncharacterized protein.	Si:dkey-23o4.6; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.698
ENSCVAP00000010792	LOC107095807	ENSCVAP00000010792	ENSCVAP00000020616	Uncharacterized protein.	S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.905
ENSCVAP00000010792	LOC107095812	ENSCVAP00000010792	ENSCVAP00000001161	Uncharacterized protein.	Zgc:77938.	0.905