23 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107093338	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (323 aa)
	aldh1a3	Aldehyde dehydrogenase 1 family, member A3; Belongs to the aldehyde dehydrogenase family. (511 aa)
	LOC107087314	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (319 aa)
	rdh10	Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (340 aa)
	LOC107102378	Si:ch1073-13h15.3. (613 aa)
	LOC107094918	LRAT domain-containing protein. (213 aa)
	ENSCVAP00000010792	Uncharacterized protein. (142 aa)
	LOC107084832	Uncharacterized protein. (611 aa)
	LOC107082507	Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (540 aa)
	dhrs3	Dehydrogenase/reductase (SDR family) member 3b; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (302 aa)
	LOC107085779	PKS_ER domain-containing protein. (378 aa)
	LOC107097534	Beta-carotene oxygenase 1, like. (451 aa)
	LOC107082284	Lecithin retinol acyltransferase b, tandem duplicate 1. (233 aa)
	LOC107082299	Lecithin retinol acyltransferase b, tandem duplicate 2. (225 aa)
	sdr16c5	Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (306 aa)
	rdh12	Retinol dehydrogenase 12. (363 aa)
	aox1	Aldehyde oxidase 6. (1332 aa)
	LOC107093921	Beta-carotene oxygenase 1. (520 aa)
	LOC107087635	Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family. (517 aa)
	LOC107102491	Dehydrogenase/reductase (SDR family) member 4. (278 aa)
	LOC107083039	Retinol dehydrogenase 8a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)
	LOC107085778	Uncharacterized protein. (348 aa)
	LOC107104087	Retinol dehydrogenase 12, like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (303 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000010792	LOC107082284	ENSCVAP00000010792	ENSCVAP00000017837	Uncharacterized protein.	Lecithin retinol acyltransferase b, tandem duplicate 1.	0.927
ENSCVAP00000010792	LOC107082299	ENSCVAP00000010792	ENSCVAP00000017840	Uncharacterized protein.	Lecithin retinol acyltransferase b, tandem duplicate 2.	0.906
ENSCVAP00000010792	LOC107082507	ENSCVAP00000010792	ENSCVAP00000012750	Uncharacterized protein.	Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.	0.916
ENSCVAP00000010792	LOC107083039	ENSCVAP00000010792	ENSCVAP00000026972	Uncharacterized protein.	Retinol dehydrogenase 8a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.689
ENSCVAP00000010792	LOC107084832	ENSCVAP00000010792	ENSCVAP00000010804	Uncharacterized protein.	Uncharacterized protein.	0.901
ENSCVAP00000010792	LOC107085778	ENSCVAP00000010792	ENSCVAP00000029545	Uncharacterized protein.	Uncharacterized protein.	0.905
ENSCVAP00000010792	LOC107085779	ENSCVAP00000010792	ENSCVAP00000014687	Uncharacterized protein.	PKS_ER domain-containing protein.	0.905
ENSCVAP00000010792	LOC107087314	ENSCVAP00000010792	ENSCVAP00000007306	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.661
ENSCVAP00000010792	LOC107087635	ENSCVAP00000010792	ENSCVAP00000024423	Uncharacterized protein.	Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.	0.910
ENSCVAP00000010792	LOC107093338	ENSCVAP00000010792	ENSCVAP00000000135	Uncharacterized protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.689
ENSCVAP00000010792	LOC107094918	ENSCVAP00000010792	ENSCVAP00000010680	Uncharacterized protein.	LRAT domain-containing protein.	0.906
ENSCVAP00000010792	LOC107102378	ENSCVAP00000010792	ENSCVAP00000010025	Uncharacterized protein.	Si:ch1073-13h15.3.	0.903
ENSCVAP00000010792	LOC107102491	ENSCVAP00000010792	ENSCVAP00000025228	Uncharacterized protein.	Dehydrogenase/reductase (SDR family) member 4.	0.914
ENSCVAP00000010792	LOC107104087	ENSCVAP00000010792	ENSCVAP00000030580	Uncharacterized protein.	Retinol dehydrogenase 12, like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.698
ENSCVAP00000010792	aldh1a3	ENSCVAP00000010792	ENSCVAP00000007261	Uncharacterized protein.	Aldehyde dehydrogenase 1 family, member A3; Belongs to the aldehyde dehydrogenase family.	0.415
ENSCVAP00000010792	dhrs3	ENSCVAP00000010792	ENSCVAP00000014037	Uncharacterized protein.	Dehydrogenase/reductase (SDR family) member 3b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.918
ENSCVAP00000010792	rdh10	ENSCVAP00000010792	ENSCVAP00000008120	Uncharacterized protein.	Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.689
ENSCVAP00000010792	rdh12	ENSCVAP00000010792	ENSCVAP00000018283	Uncharacterized protein.	Retinol dehydrogenase 12.	0.793
ENSCVAP00000010792	sdr16c5	ENSCVAP00000010792	ENSCVAP00000018218	Uncharacterized protein.	Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.911
LOC107082284	ENSCVAP00000010792	ENSCVAP00000017837	ENSCVAP00000010792	Lecithin retinol acyltransferase b, tandem duplicate 1.	Uncharacterized protein.	0.927