STRINGSTRING
lbr lbr fa2h fa2h msmo1 msmo1 LOC107095021 LOC107095021 LOC107099593 LOC107099593 dhcr7 dhcr7 LOC107097647 LOC107097647 ENSCVAP00000011191 ENSCVAP00000011191 ENSCVAP00000012393 ENSCVAP00000012393 fbxo43 fbxo43 r3hdm4 r3hdm4 tm7sf2 tm7sf2 sqle sqle nsdhl nsdhl fdft1 fdft1 ERG28 ERG28 LOC107086204 LOC107086204 CYP27A1 CYP27A1 soat1 soat1 LOC107105109 LOC107105109 LOC107098555 LOC107098555 sigmar1 sigmar1 LOC107100354 LOC107100354 LOC107096820 LOC107096820 HSD17B7 HSD17B7 sc5d sc5d hsd3b7 hsd3b7 LOC107090983 LOC107090983 LOC107097654 LOC107097654 ebp ebp LOC107102957 LOC107102957 dhcr24 dhcr24 LOC107099916 LOC107099916 LOC107099912 LOC107099912 LOC107103459 LOC107103459 ENSCVAP00000029936 ENSCVAP00000029936 ch25h ch25h sdr42e1 sdr42e1 LOC107095844 LOC107095844 lss lss faxdc2 faxdc2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lbrLamin B receptor. (623 aa)
fa2hFatty acid 2-hydroxylase; Catalyzes stereospecific hydroxylation of free fatty acids at the C-2 position to produce (R)-2-hydroxy fatty acids, which are building blocks of sphingolipids and glycosphingolipids common in neural tissue and epidermis. Plays an essential role in the synthesis of galactosphingolipids of the myelin sheath. Responsible for the synthesis of sphingolipids and glycosphingolipids involved in the formation of epidermal lamellar bodies critical for skin permeability barrier. Participates in the synthesis of glycosphingolipids and a fraction of type II wax diesters i [...] (381 aa)
msmo1Methylsterol monooxygenase 1; Belongs to the sterol desaturase family. (304 aa)
LOC107095021Zgc:153372. (361 aa)
LOC107099593Hydroxysteroid (17-beta) dehydrogenase 7. (370 aa)
dhcr77-dehydrocholesterol reductase. (470 aa)
LOC107097647Uncharacterized protein; Belongs to the cytochrome P450 family. (507 aa)
ENSCVAP00000011191Cholesterol 25-hydroxylase like 2; Belongs to the sterol desaturase family. (277 aa)
ENSCVAP00000012393RGS domain-containing protein. (503 aa)
fbxo43F-box domain-containing protein. (514 aa)
r3hdm4R3H domain containing 4. (255 aa)
tm7sf2Transmembrane 7 superfamily member 2. (430 aa)
sqleSqualene epoxidase a. (570 aa)
nsdhlNAD(P) dependent steroid dehydrogenase-like; Belongs to the 3-beta-HSD family. (369 aa)
fdft1Farnesyl-diphosphate farnesyltransferase 1. (417 aa)
ERG28Ergosterol biosynthesis 28 homolog. (143 aa)
LOC107086204Uncharacterized protein; Belongs to the cytochrome P450 family. (517 aa)
CYP27A1Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family. (510 aa)
soat1O-acyltransferase. (570 aa)
LOC107105109Cholesterol 25-hydroxylase like 1, tandem duplicate 2; Belongs to the sterol desaturase family. (277 aa)
LOC107098555Cholesterol 25-hydroxylase like 3; Belongs to the sterol desaturase family. (278 aa)
sigmar1Sigma non-opioid intracellular receptor 1. (222 aa)
LOC107100354Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (498 aa)
LOC107096820Si:ch211-113j14.1; Belongs to the cytochrome P450 family. (532 aa)
HSD17B7Hydroxysteroid 17-beta dehydrogenase 7. (345 aa)
sc5dSterol-C5-desaturase; Belongs to the sterol desaturase family. (294 aa)
hsd3b7Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase; Belongs to the 3-beta-HSD family. (366 aa)
LOC107090983Phosphoethanolamine methyltransferase. (492 aa)
LOC107097654Uncharacterized protein. (507 aa)
ebpEBP cholestenol delta-isomerase. (229 aa)
LOC107102957Cytochrome P450, family 51; Belongs to the cytochrome P450 family. (499 aa)
dhcr2424-dehydrocholesterol reductase. (415 aa)
LOC107099916Cholesterol 25-hydroxylase-like protein 1, member 2. (277 aa)
LOC107099912Cholesterol 25-hydroxylase like 1, tandem duplicate 1; Belongs to the sterol desaturase family. (275 aa)
LOC107103459Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family. (513 aa)
ENSCVAP00000029936Cytochrome P450, family 8, subfamily B, polypeptide 2. (520 aa)
ch25hCholesterol 25-hydroxylase; Belongs to the sterol desaturase family. (251 aa)
sdr42e1Short chain dehydrogenase/reductase family 42E, member 1; Belongs to the 3-beta-HSD family. (389 aa)
LOC107095844Si:dkey-91i10.3; Belongs to the cytochrome P450 family. (533 aa)
lssTerpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (733 aa)
faxdc2Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family. (333 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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