11 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCVAP00000001293	THAP-type domain-containing protein. (87 aa)
	ENSCVAP00000002150	THAP-type domain-containing protein. (95 aa)
	ENSCVAP00000008602	Uncharacterized protein. (692 aa)
	cbx5	Chromobox homolog 5 (HP1 alpha homolog, Drosophila). (199 aa)
	pcgf1	Polycomb group ring finger 1. (260 aa)
	yaf2	YY1 associated factor 2. (191 aa)
	YAF2	YY1 associated factor 2. (181 aa)
	LOC107084325	Chromobox homolog 3a (HP1 gamma homolog, Drosophila). (177 aa)
	pcgf6	Polycomb group ring finger 6. (248 aa)
	ENSCVAP00000030025	Si:ch211-195d17.2. (365 aa)
	LOC107104038	Mbt domain containing 1. (693 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000001293	ENSCVAP00000008602	ENSCVAP00000001293	ENSCVAP00000008602	THAP-type domain-containing protein.	Uncharacterized protein.	0.672
ENSCVAP00000001293	ENSCVAP00000030025	ENSCVAP00000001293	ENSCVAP00000030025	THAP-type domain-containing protein.	Si:ch211-195d17.2.	0.903
ENSCVAP00000001293	LOC107084325	ENSCVAP00000001293	ENSCVAP00000025187	THAP-type domain-containing protein.	Chromobox homolog 3a (HP1 gamma homolog, Drosophila).	0.753
ENSCVAP00000001293	YAF2	ENSCVAP00000001293	ENSCVAP00000021027	THAP-type domain-containing protein.	YY1 associated factor 2.	0.863
ENSCVAP00000001293	cbx5	ENSCVAP00000001293	ENSCVAP00000010522	THAP-type domain-containing protein.	Chromobox homolog 5 (HP1 alpha homolog, Drosophila).	0.681
ENSCVAP00000001293	pcgf1	ENSCVAP00000001293	ENSCVAP00000010881	THAP-type domain-containing protein.	Polycomb group ring finger 1.	0.804
ENSCVAP00000001293	pcgf6	ENSCVAP00000001293	ENSCVAP00000029240	THAP-type domain-containing protein.	Polycomb group ring finger 6.	0.873
ENSCVAP00000001293	yaf2	ENSCVAP00000001293	ENSCVAP00000019979	THAP-type domain-containing protein.	YY1 associated factor 2.	0.863
ENSCVAP00000002150	ENSCVAP00000008602	ENSCVAP00000002150	ENSCVAP00000008602	THAP-type domain-containing protein.	Uncharacterized protein.	0.658
ENSCVAP00000002150	ENSCVAP00000030025	ENSCVAP00000002150	ENSCVAP00000030025	THAP-type domain-containing protein.	Si:ch211-195d17.2.	0.809
ENSCVAP00000002150	LOC107084325	ENSCVAP00000002150	ENSCVAP00000025187	THAP-type domain-containing protein.	Chromobox homolog 3a (HP1 gamma homolog, Drosophila).	0.645
ENSCVAP00000002150	YAF2	ENSCVAP00000002150	ENSCVAP00000021027	THAP-type domain-containing protein.	YY1 associated factor 2.	0.662
ENSCVAP00000002150	cbx5	ENSCVAP00000002150	ENSCVAP00000010522	THAP-type domain-containing protein.	Chromobox homolog 5 (HP1 alpha homolog, Drosophila).	0.645
ENSCVAP00000002150	pcgf1	ENSCVAP00000002150	ENSCVAP00000010881	THAP-type domain-containing protein.	Polycomb group ring finger 1.	0.698
ENSCVAP00000002150	pcgf6	ENSCVAP00000002150	ENSCVAP00000029240	THAP-type domain-containing protein.	Polycomb group ring finger 6.	0.698
ENSCVAP00000002150	yaf2	ENSCVAP00000002150	ENSCVAP00000019979	THAP-type domain-containing protein.	YY1 associated factor 2.	0.662
ENSCVAP00000008602	ENSCVAP00000001293	ENSCVAP00000008602	ENSCVAP00000001293	Uncharacterized protein.	THAP-type domain-containing protein.	0.672
ENSCVAP00000008602	ENSCVAP00000002150	ENSCVAP00000008602	ENSCVAP00000002150	Uncharacterized protein.	THAP-type domain-containing protein.	0.658
ENSCVAP00000008602	ENSCVAP00000030025	ENSCVAP00000008602	ENSCVAP00000030025	Uncharacterized protein.	Si:ch211-195d17.2.	0.793
ENSCVAP00000008602	LOC107084325	ENSCVAP00000008602	ENSCVAP00000025187	Uncharacterized protein.	Chromobox homolog 3a (HP1 gamma homolog, Drosophila).	0.482