STRINGSTRING
syf2 syf2 bcas2 bcas2 crnkl1 crnkl1 ctnnbl1 ctnnbl1 cdc5l cdc5l LOC107103552 LOC107103552 plrg1 plrg1 xab2 xab2 prpf19 prpf19 rbm22 rbm22
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
syf2SYF2 pre-mRNA-splicing factor. (239 aa)
bcas2BCAS2 pre-mRNA processing factor. (225 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (743 aa)
ctnnbl1Catenin, beta like 1. (574 aa)
cdc5lCDC5 cell division cycle 5-like (S. pombe). (670 aa)
LOC107103552ISY1 splicing factor homolog. (280 aa)
plrg1Pleiotropic regulator 1. (512 aa)
xab2XPA binding protein 2. (849 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
rbm22RNA binding motif protein 22. (427 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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